PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_A33076690.3
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 339aa    MW: 36573.6 Da    PI: 5.9642
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_A33076690.3genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.93.9e-3247101155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            ++rlrWt eLH rF+eav+qLGG+++AtPk il++m+v+gLt++hvkSHLQkYRl
  Traes_7AL_A33076690.3  47 RQRLRWTDELHGRFLEAVAQLGGPDRATPKGILRTMGVQGLTIYHVKSHLQKYRL 101
                            58****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.64244104IPR017930Myb domain
SuperFamilySSF466896.63E-1846101IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-3046102IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-2548102IPR006447Myb domain, plants
PfamPF002492.2E-849100IPR001005SANT/Myb domain
PfamPF143791.8E-19133179IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MYEPKPFSST GSAHSNPVSH DQQIGPTANN AASNIGGNGS NNSFATRQRL RWTDELHGRF  60
LEAVAQLGGP DRATPKGILR TMGVQGLTIY HVKSHLQKYR LAKYIPDPTA SGDKPEKKDL  120
GNLLAGMENS PGMETSEVLK LQVEVQKRLR EQLEVQRQLQ LRIEAQGKYL QKIMEEQQRL  180
SGVLCESGKP NALALAEEEL HHDFSKTEPS TPVLTSEPSF RDKAVTASGG LEGTDELLKV  240
LSSHDDCLSL DHELSTPDSS CVAGYLLNSP RDSKRACISN SLGHGNSEFT LPHIIPESSS  300
GSDLQLRSSV FSYGTGRSGS SAALDASEDG FTNGSGSDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A4e-2247104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-2247104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-2247104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-2247104158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP3304850.0KP330485.1 Triticum aestivum MYB transcription factor SM154 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148390.10.0myb family transcription factor PHL7-like
RefseqXP_020148391.10.0myb family transcription factor PHL7-like
SwissprotQ9SJW06e-82PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A3B6RMP80.0A0A3B6RMP8_WHEAT; Uncharacterized protein
STRINGTraes_7AL_A33076690.30.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.15e-69G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]