PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7AL_A086258BE.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 158aa MW: 17027.5 Da PI: 4.8206 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 31.1 | 5.1e-10 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+vk+Ltl+hvkSHLQ+YR+ Traes_7AL_A086258BE.1 1 MDVKDLTLAHVKSHLQMYRT 20 9******************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.5E-8 | 1 | 21 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
MDVKDLTLAH VKSHLQMYRT VKNTERPAAS SDQADGFENG SAGEICDDNL LDLRGGGRPE 60 ALAAATRNGR LAANDDDRSI GAGATHGGAL WNSSSREEDW SGFPCDSNNE SMQSFKDHMQ 120 SKSLEILSDI NSCLSETTSS ASAPNLDFTL GRPHQRRS |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU957008 | 4e-50 | EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds. | |||
GenBank | KJ726819 | 4e-50 | KJ726819.1 Zea mays clone pUT3358 G2-like transcription factor (GLK55) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020178603.1 | 1e-108 | probable transcription factor KAN2 | ||||
TrEMBL | A0A3B6RFV8 | 1e-109 | A0A3B6RFV8_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446XHK6 | 1e-109 | A0A446XHK6_TRITD; Uncharacterized protein | ||||
STRING | Traes_7AL_A086258BE.1 | 1e-113 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4721 | 36 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32240.1 | 2e-19 | G2-like family protein |
Publications ? help Back to Top | |||
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