PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_7AL_01C8BD51A.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BES1 | ||||||||
Protein Properties | Length: 65aa MW: 6588.18 Da PI: 7.3496 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 54.7 | 4.2e-17 | 1 | 65 | 61 | 123 |
DUF822 61 vvedDGttyrkgskpleeaeaag.ssasaspesslq.sslkssalaspvesysaspksssfpsps 123 vvedDGttyrkg+kp+++ +g ss +s +ss+q +s+ ss+++spv+sy++sp+sssfpsp+ Traes_7AL_01C8BD51A.1 1 VVEDDGTTYRKGYKPPSSGPFGGvSSMGMSSCSSSQvLSAPSSSFPSPVPSYHPSPTSSSFPSPT 65 7***************6666655155569*******9**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.5E-15 | 1 | 65 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 65 aa Download sequence Send to blast |
VVEDDGTTYR KGYKPPSSGP FGGVSSMGMS SCSSSQVLSA PSSSFPSPVP SYHPSPTSSS 60 FPSPT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JN400739 | 3e-76 | JN400739.1 Triticum aestivum cultivar Chinese Spring BES1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020151437.1 | 2e-15 | protein BZR1 homolog 1 | ||||
TrEMBL | A0A446M3E3 | 1e-19 | A0A446M3E3_TRITD; Uncharacterized protein | ||||
STRING | Traes_7AL_01C8BD51A.1 | 2e-35 | (Triticum aestivum) |
Publications ? help Back to Top | |||
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