PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_6BL_53201E1DB.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 70aa MW: 7581.29 Da PI: 4.8893 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 32.9 | 1.4e-10 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+vk+Ltl+hvkSHLQ+YR+ Traes_6BL_53201E1DB.1 1 MDVKDLTLAHVKSHLQMYRT 20 9******************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.4E-9 | 1 | 20 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 70 aa Download sequence Send to blast |
MDVKDLTLAH VKSHLQMYRT IKTTDHKPAA ASSYGQAKTI IDIPDDSSFD IANTSGSESS 60 VQQSNLDGNE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020156181.1 | 2e-42 | probable transcription factor KAN2 isoform X3 | ||||
TrEMBL | A0A453PBI4 | 3e-43 | A0A453PBI4_AEGTS; Uncharacterized protein | ||||
STRING | EMT12202 | 4e-43 | (Aegilops tauschii) | ||||
STRING | Traes_6AL_B2256B77F.2 | 3e-41 | (Triticum aestivum) | ||||
STRING | Traes_6BL_53201E1DB.1 | 3e-44 | (Triticum aestivum) | ||||
STRING | Traes_6DL_DB1546316.1 | 1e-40 | (Triticum aestivum) | ||||
STRING | TRIUR3_34123-P1 | 4e-43 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9438 | 34 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 3e-13 | G2-like family protein |
Publications ? help Back to Top | |||
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