PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_6BL_35444DAF9.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 227aa MW: 25203.8 Da PI: 8.5463 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 27.2 | 1.3e-08 | 32 | 71 | 51 | 90 |
FAR1 51 errtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ ++ + r+ C a++++ +++d+ w++t +++HnH+l+ Traes_6BL_35444DAF9.2 32 KKGNKRTCRCRCPAMIRLLRSSDNGWYITYYRSDHNHALT 71 56678899******************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 6.8E-6 | 33 | 71 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MSGDCPLCSS LRAIYGERRP SSPCLGEKGI PKKGNKRTCR CRCPAMIRLL RSSDNGWYIT 60 YYRSDHNHAL TERCGEKVYW PSHKHIDIYT RDVIKQLREN NISVGKVYNI IGSFFGSMTN 120 IPFTKRALRG LCGKMSGEQA DNDVKKTMDV FAELGAKDSG LYCRVQPDVF AELGGKDSEL 180 SLSAADSQLS TAKDDPQAPG GQKGFVLDEP LSNVHLVLDE CVPLKKH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 36 | PKKGNKR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020146725.1 | 1e-73 | protein FAR1-RELATED SEQUENCE 5-like | ||||
Refseq | XP_020146726.1 | 1e-73 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A453J355 | 6e-81 | A0A453J355_AEGTS; Uncharacterized protein | ||||
STRING | Traes_6BL_35444DAF9.2 | 1e-170 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP619 | 19 | 91 |
Publications ? help Back to Top | |||
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