PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_6AS_1FB5A49D7.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 251aa MW: 26952 Da PI: 10.3697

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_6AS_1FB5A49D7.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.5	5.1e-07	149	191	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 RqRKk+++ e ++ v +L eN++L +e+ el+ +++l +e+ Traes_6AS_1FB5A49D7.1 149 RQRKKMRLPEVQQLVRSLAVENESLHEEMRELQRACSALSKEN 191 9*************************************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.0E-4	149	187	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence Send to blast
MATADDAVAA DIICSLRGAD LAGWTPPWSK RGRPMEEARE LSWPAVARGK RSRRRSPASS 60 SATAAAGGKA ARCARSSPAS PLDYSAGSAS LRSGASTSGG EDGAFCSPWH RRAATAPATA 120 TTKTTTKVGS IRRPQLTFQA PPPRPAGQRQ RKKMRLPEVQ QLVRSLAVEN ESLHEEMREL 180 QRACSALSKE NDKLETRIEQ SNSRNEAALK EQKGKQQQQL DQQQQQSPHD SFALPDLNLP 240 AQDGADGSAP C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	154	RQRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK364210	1e-157	AK364210.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2022L02.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020195852.1	1e-126	uncharacterized protein LOC109781670 isoform X2
TrEMBL	A0A3B6NNQ2	1e-180	A0A3B6NNQ2_WHEAT; Uncharacterized protein
TrEMBL	A0A446V937	1e-180	A0A446V937_TRITD; Uncharacterized protein
STRING	Traes_6AS_1FB5A49D7.1	1e-180	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148]