PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6AL_B2256B77F.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 355aa    MW: 38054.7 Da    PI: 8.2041
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6AL_B2256B77F.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1023.8e-32171224255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Traes_6AL_B2256B77F.2 171 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 224
                            9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.4E-29168224IPR009057Homeodomain-like
SuperFamilySSF466892.15E-15169225IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-23171225IPR006447Myb domain, plants
PfamPF002491.8E-7172223IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MELFPSHPDL QLQLQINPPP ATKPMDLGFW KRALDTTAAA AATSASAAAT FTPPSIARTY  60
PSAPAAAGGG FHAAHYGAAD GHLGGLQFLQ HTQPILHEVQ DLAAMKPIRG IPVYNTSQSL  120
PFLQSQLHHH NHHHQHCYDA IGGAAGGPRS PGKVGALRLA APPAKRNSRA PRMRWTTSLH  180
ARFVHAVELL GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTIKTTDH KPAAASSYGQ  240
AKTIIDIPDD SSFDIANTSG SESSVQQSNL DGNEHGSNMC ALWSNNSSSR GAWSFHGKSR  300
SDANPGDIKS FEDVQSQCPN VVADDAADLM SAPFRLSELV VGTKKPNLDF TLGRM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A9e-17172226357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B9e-17172226357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C9e-17172226357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D9e-17172226357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-16172226458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0369113e-77BT036911.1 Zea mays full-length cDNA clone ZM_BFb0147F05 mRNA, complete cds.
GenBankKJ7268293e-77KJ726829.1 Zea mays clone pUT3369 G2-like transcription factor (GLK47) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156179.10.0probable transcription factor KAN2 isoform X1
TrEMBLA0A3B6NQV80.0A0A3B6NQV8_WHEAT; Uncharacterized protein
TrEMBLA0A446VK520.0A0A446VK52_TRITD; Uncharacterized protein
STRINGTraes_6AL_B2256B77F.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94383445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17695.15e-43G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]