PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6AL_29B0A4DF2.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 78aa    MW: 8927.02 Da    PI: 7.5056
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6AL_29B0A4DF2.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.71.6e-063561127
                           CHHHHHHHHHHHHHHHHHHHHHHHCTS CS
                    HLH  1 rrrahnerErrRRdriNsafeeLrell 27
                           r++ +  rEr RRd++N+ f eL + l
  Traes_6AL_29B0A4DF2.1 35 RKVHKADRERMRRDKLNEQFLELGTTL 61
                           5777889****************8765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.62E-62665IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-53565IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
MDPQEDGFFY SHHGACHADS SQGTECKAQS SVTARKVHKA DRERMRRDKL NEQFLELGTT  60
LGMMQQLVSC TKLHYCYS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149420.11e-35transcription factor bHLH121-like
TrEMBLA0A446VEW05e-52A0A446VEW0_TRITD; Uncharacterized protein
STRINGTraes_6AL_29B0A4DF2.19e-53(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.16e-08bHLH family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]