PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_B2F166A31.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 264aa    MW: 28831.4 Da    PI: 9.7767
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_B2F166A31.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.8e-32141196156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W+peLH++Fv a++qLGG+++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+
  Traes_5DL_B2F166A31.2 141 KTRRCWSPELHRHFVAALHQLGGPQVATPKQIREMMKVDGLTNDEVKSHLQKYRLH 196
                            68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.823138198IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.8E-29138199IPR009057Homeodomain-like
SuperFamilySSF466896.81E-17139199IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-25141196IPR006447Myb domain, plants
PfamPF002491.5E-7143194IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MKEEAAKRSE RRDADDNDKR KWMSTAQLWV DSRATDAADP VKEQRKESAL SKPMLLGGAI  60
GAPMAASCRA MPPPAAPQYF GRDDKIVGTQ GLPALPMISP AANRQFSPPV DDRHQAFAAK  120
FAAPMPPPGP GLQTHDQQSR KTRRCWSPEL HRHFVAALHQ LGGPQVATPK QIREMMKVDG  180
LTNDEVKSHL QKYRLHNQRC PSSSSASHPV MLVGDLWAHQ EQSSSQSRSP EGPLQLSVSG  240
VAVSALTGSD SSEEDGRSVG YSRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-13141194154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-13141194154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-13141194154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-13141194154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-13141199260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519440.0JF951944.1 Triticum aestivum clone TaMYB61 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199780.10.0uncharacterized protein LOC109785601
TrEMBLA0A3B6MY360.0A0A3B6MY36_WHEAT; Uncharacterized protein
STRINGTraes_5DL_B2F166A31.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-32G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]