PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_6A730A96A.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 384aa    MW: 44322.2 Da    PI: 6.8719
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_6A730A96A.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-156.94.1e-1825762117
                   CG-1  62 dgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                            dgk+  E+he L v++v +l+cy  h e++ptfqrr+yw Le ++++ivlvhy++v
  Traes_5DL_6A730A96A.2   2 DGKSDYEAHEYLEVDNVRALNCYSGHVEKKPTFQRRIYWTLEPAYQHIVLVHYRDV 57 
                            99***************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143729.828163IPR005559CG-1 DNA-binding domain
SMARTSM010760.0038158IPR005559CG-1 DNA-binding domain
PfamPF038591.1E-14257IPR005559CG-1 DNA-binding domain
SuperFamilySSF561122.56E-7159361IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.204.6E-2662148No hitNo description
PROSITE profilePS5001136.54179369IPR000719Protein kinase domain
SMARTSM002201.0E-3279369IPR000719Protein kinase domain
PfamPF000693.2E-4781358IPR000719Protein kinase domain
PROSITE patternPS00107085108IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.102.7E-43173360No hitNo description
PROSITE patternPS001080214226IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MDGKSDYEAH EYLEVDNVRA LNCYSGHVEK KPTFQRRIYW TLEPAYQHIV LVHYRDVLKT  60
TPTLNHMPLQ HLKDITNNFC NERILGRGGY GVVYKGVLGN GKMVAVKKIV QSVSSSHEQF  120
ENEVNLLMKL KHPNIVRLLG YCYETQHLRK LHEGKFIFVW YTECLLCLEY LPKGSLDKYI  180
SDASSGLDWP TRLKIIEGIS YGLQYLHEQS DGPIIHLDLK PANVLLDEDM IPKITDFGLS  240
RLFDQKQTIH TAITIGTLGY MPLEYLRGII TPMSDIFGLG VIIMEVITGH RDYPYDIRKS  300
STEFIECELQ KWTNALQKEP RYTSLEMDCQ RITRCIQIGL ICVNPERTKR PTMKKIIDML  360
QGLESMDWYI SNELSSPNIQ AEAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3uim_A2e-546436217308BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3ulz_A2e-546436217308BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189692.10.0putative receptor-like protein kinase At4g00960
TrEMBLA0A3B6N3330.0A0A3B6N333_WHEAT; Uncharacterized protein
STRINGTraes_5DL_6A730A96A.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4635
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.12e-19Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]