PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_FB4EDEA83.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 323aa    MW: 35997.7 Da    PI: 8.4453
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_FB4EDEA83.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.9e-15251296348
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                            +++r++r++kNRe+A rsR+RK+a++ eLe k   Le+eNk+Lk e
  Traes_5BL_FB4EDEA83.2 251 ADRRQKRMIKNRESAARSRARKQAYTNELECKLSCLEEENKRLKRE 296
                            689****************************************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.4E-9249305IPR004827Basic-leucine zipper domain
PfamPF001703.6E-12251297IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944251296IPR004827Basic-leucine zipper domain
CDDcd147074.42E-20253307No hitNo description
Gene3DG3DSA:1.20.5.1704.6E-13253298No hitNo description
SuperFamilySSF579591.13E-10253298No hitNo description
PROSITE patternPS000360256271IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MSLVKHKTGK MSSEGGGTAI TGKKRNRAQI QTLVREGSLY NLTLSEVESH LGAPLLSMNL  60
DDFVRSVLPD EKNLPLPNGA GNSGSQSTSA FGLERQGSSI TVPLPLSKKT VDEIWRDIQQ  120
EEESSDDEKR SSGCEAQMSF GEITLEEFLQ RAGIVTGQYQ KDAEELIDLV GTGESAHMMT  180
RVQDFPQGTS AIDAYIVRQS IAQPLSVAIP STMDSIYPDR QMSISSSLEL SDLQSPSRKR  240
MSSQDVVYKV ADRRQKRMIK NRESAARSRA RKQAYTNELE CKLSCLEEEN KRLKREKELD  300
MLLKSAPPPE PKKHLRRTRS TSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12127GKKRNRA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3071140.0EU307114.1 Triticum aestivum FD-like 6 protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172286.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A3B6LJJ90.0A0A3B6LJJ9_WHEAT; Uncharacterized protein
TrEMBLA0A446U3A40.0A0A446U3A4_TRITD; Uncharacterized protein
STRINGTraes_5BL_FB4EDEA83.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1859879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-50ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]