PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_E93713C14.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family BES1
Protein Properties Length: 184aa    MW: 20056.8 Da    PI: 10.3888
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_E93713C14.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822141.86.4e-44421692141
                 DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaag.ssasa 88 
                            g gr+ptwkErEnnkrRERrRRaia+ki++GLRa   ykl         lk LcreA wvvedDGttyrkg+k++++   +g ss  +
  Traes_5BL_E93713C14.1  42 GLGRTPTWKERENNKRRERRRRAIATKIFTGLRALDSYKL---------LKELCREAEWVVEDDGTTYRKGYKQPSSGPFGGvSSVGM 120
                            679**********************************998.........899**********************9666655515556* PP

                 DUF822  89 spesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvls 141
                            sp+ss+q  l +s++ spv+sy++s +sssfpsp++ld+ s    a l+p+l+
  Traes_5BL_E93713C14.1 121 SPCSSSQ-LLGASSFLSPVPSYHPSSASSSFPSPTRLDNPSP---AYLFPFLR 169
                            *****99.889999***********************98744...46666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.0E-3843158IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
HVLVSHLPLP SPNPPLSIPY SLQRGITAAD LLPPIATEAD AGLGRTPTWK ERENNKRRER  60
RRRAIATKIF TGLRALDSYK LLKELCREAE WVVEDDGTTY RKGYKQPSSG PFGGVSSVGM  120
SPCSSSQLLG ASSFLSPVPS YHPSSASSSF PSPTRLDNPS PAYLFPFLRG LPNLPLLRVS  180
NSRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-1145117372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-1145117372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-1145117372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-1145117372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPositive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid biosynthetic genes. May act as transcriptional repressor by binding the brassinosteroid-response element (5'-CGTGCG-3') in the promoter of GRAS32 (AC Q9LWU9), another positive regulator of brassinosteroid signaling (By similarity). {ECO:0000250}.
UniProtPositive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid (BR) biosynthetic genes (PubMed:17699623, PubMed:19220793). May act as transcriptional repressor by binding the brassinosteroid-response element (BREE) (5'-CGTG(T/C)G-3') in the promoter of DLT (AC Q9LWU9), another positive regulator of BR signaling (PubMed:19220793). Acts as transcriptional repressor of LIC, a negative regulator of BR signaling, by binding to the BRRE element of its promoter. BZR1 and LIC play opposite roles in BR signaling and regulation of leaf bending (PubMed:22570626). {ECO:0000269|PubMed:17699623, ECO:0000269|PubMed:19220793, ECO:0000269|PubMed:22570626}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269|PubMed:22570626}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3543701e-111AK354370.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1006N24.
GenBankAK3594531e-111AK359453.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1097E19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151437.13e-44protein BZR1 homolog 1
SwissprotB8B7S56e-33BZR1_ORYSI; Protein BZR1 homolog 1
SwissprotQ7XI966e-33BZR1_ORYSJ; Protein BZR1 homolog 1
TrEMBLA0A446M3E32e-49A0A446M3E3_TRITD; Uncharacterized protein
STRINGTraes_5BL_E93713C14.11e-129(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54743453
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.17e-16BES1/BZR1 homolog 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Tong H, et al.
    DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice.
    Plant Cell, 2012. 24(6): p. 2562-77
    [PMID:22685166]
  3. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]