PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_B795CE108.2
Common NameCBF14, CBF-B14
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 214aa    MW: 23597.8 Da    PI: 7.032
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_B795CE108.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.21.5e-163788255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                            y+GVr++   grWv+e+r+    g +  r +lg+f tae+Aa+a++aa ++l g
  Traes_5BL_B795CE108.2 37 LYRGVRRRGPAGRWVCEVRVL---GmRGSRLWLGTFTTAEMAARAHDAAVLALSG 88
                           69***************9994...6555*********************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.73E-213698No hitNo description
PfamPF008471.3E-103687IPR001471AP2/ERF domain
SMARTSM003801.0E-2037102IPR001471AP2/ERF domain
PROSITE profilePS5103220.2973796IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-183798IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-273798IPR001471AP2/ERF domain
PRINTSPR003671.7E-53849IPR001471AP2/ERF domain
PRINTSPR003671.7E-56278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009631Biological Processcold acclimation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MDAADAASPC DGHRTVWSEP PKRPAGRTKF KETRHPLYRG VRRRGPAGRW VCEVRVLGMR  60
GSRLWLGTFT TAEMAARAHD AAVLALSGRA ACLNFADSAW RMLPVLAGPF STAKEIKDAV  120
AVAVLAFQRQ HRVASMAPLS PARTTDDEKE IDGSPAPSAL FMSSELLNEH WFGGMDAGSF  180
YSEGLFMESP DTRPWREDLE LCGVETPPWS YLFD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1335951271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress (By similarity). {ECO:0000250}.
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress. {ECO:0000269|PubMed:16284406}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00452DAPTransfer from AT4G25470Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold stress. {ECO:0000269|PubMed:12609047}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY5728310.0AY572831.1 Triticum aestivum C repeat-binding factor 2 mRNA, complete cds.
GenBankAY7859010.0AY785901.1 Triticum aestivum cultivar Chinese Spring TaCBF14 (CBF14) mRNA, complete cds.
GenBankEF0287780.0EF028778.1 Triticum aestivum CBFIVc-B14 mRNA, complete cds.
GenBankHG5309290.0HG530929.1 Triticum aestivum CBF-B14 gene for C-repeat binding factor, cultivar Eltan.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167745.11e-150dehydration-responsive element-binding protein 1B-like
SwissprotQ3T5N44e-50DRE1B_ORYSJ; Dehydration-responsive element-binding protein 1B
SwissprotQ8GUW45e-50DRE1B_ORYSI; Dehydration-responsive element-binding protein 1B
TrEMBLQ56UQ41e-154Q56UQ4_WHEAT; C repeat-binding factor 2
STRINGTraes_5BL_B795CE108.21e-155(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-33C-repeat/DRE binding factor 2
Publications ? help Back to Top
  1. Skinner JS, et al.
    Structural, functional, and phylogenetic characterization of a large CBF gene family in barley.
    Plant Mol. Biol., 2005. 59(4): p. 533-51
    [PMID:16244905]
  2. Badawi M,Danyluk J,Boucho B,Houde M,Sarhan F
    The CBF gene family in hexaploid wheat and its relationship to the phylogenetic complexity of cereal CBFs.
    Mol. Genet. Genomics, 2007. 277(5): p. 533-54
    [PMID:17285309]
  3. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]