PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5BL_2111E509E.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 177aa MW: 19309.3 Da PI: 9.7048 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.6 | 5.9e-24 | 9 | 91 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++w+fF +r++++ +g r+ r+t sgyWkatg+ v+s+ +++++g+k+t+vfy+grap+g kt+W m+ey++ Traes_5BL_2111E509E.1 9 DAEQWFFFYPRAERELRGGRPARTTPSGYWKATGSPSGVFSSssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 91 5679************************************99888888877777***************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 31.065 | 1 | 110 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-25 | 7 | 109 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-11 | 12 | 90 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MAGEASVQDA EQWFFFYPRA ERELRGGRPA RTTPSGYWKA TGSPSGVFSS SSSSAAAGNS 60 KVIGVKRTMV FYQGRAPTGA KTTWKMNEYK AVAADNDLRN EFSVCRLYIS TGTLRSFDRR 120 PLNTSGNGQA AARRHVPSAA NTASIGQADN YQGWSTLVTT STTDVDNFCF DMDFNQL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 8e-16 | 11 | 108 | 71 | 163 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-16 | 11 | 108 | 71 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-16 | 11 | 108 | 71 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-16 | 11 | 108 | 71 | 163 | NO APICAL MERISTEM PROTEIN |
3swm_A | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3swm_B | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3swm_C | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3swm_D | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3swp_A | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3swp_B | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3swp_C | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3swp_D | 8e-16 | 11 | 108 | 74 | 166 | NAC domain-containing protein 19 |
3ulx_A | 1e-15 | 4 | 108 | 62 | 166 | Stress-induced transcription factor NAC1 |
4dul_A | 8e-16 | 11 | 108 | 71 | 163 | NAC domain-containing protein 19 |
4dul_B | 8e-16 | 11 | 108 | 71 | 163 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020185458.1 | 1e-106 | NAC domain-containing protein 90-like isoform X1 | ||||
Swissprot | Q9FMR3 | 4e-45 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A446U233 | 1e-119 | A0A446U233_TRITD; Uncharacterized protein | ||||
STRING | Traes_5BL_2111E509E.1 | 1e-129 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1005 | 38 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44350.2 | 1e-42 | NAC domain containing protein 61 |
Publications ? help Back to Top | |||
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