PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_521868848.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 325aa    MW: 35798.1 Da    PI: 5.8352
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_521868848.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.62.3e-07241263325
                            XXCHHHCHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKk 25 
                            +++r++r++kNRe+A rsR+RK+
  Traes_5AL_521868848.2 241 ADRRQKRMIKNRESAARSRARKQ 263
                            689*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-5239274No hitNo description
PROSITE patternPS000360246261IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MSSEGGGTAI TGKKRNRAQI QTLVREGSLY NLTLSEVESH LGAPLLSMNL DDFVRSVLPD  60
EKNLPLPNGA GNSGSQSTSA FGLERQGSSI TVPLPLSKKT VDEIWRDIQQ EEESSDDEKR  120
SSGCDAQMSF GEITLEEFLQ RAGIVTGQYQ KDAEELIDLV GTGESAHLMT RVQDFPQGTS  180
AIDAYIVRQS IAQPLSVAIP STMDSIYPDR QMSISSSLEL SDLQSPSRKR MSSQDVVYKV  240
ADRRQKRMIK NRESAARSRA RKQGLHKRAR MQTVLSGRGE QEAEEREGVG HVIEVRAPSR  300
TEKASSENEI DLILIVCRVQ ASGRF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11117GKKRNRA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3071140.0EU307114.1 Triticum aestivum FD-like 6 protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172286.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A446SXS80.0A0A446SXS8_TRITD; Uncharacterized protein
STRINGTraes_5AL_521868848.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1859879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.15e-41ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]