PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_2F93FD88F.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 321aa    MW: 35347.1 Da    PI: 7.7513
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_2F93FD88F.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.95.3e-2455108255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            prlrWtpeLH++Fv+a         AtPk +l+lm+v gL++ hvkSHLQ+YR+
  Traes_5AL_2F93FD88F.2  55 PRLRWTPELHHCFVRAXXXXXXXXXATPKLVLQLMNVRGLSIGHVKSHLQMYRS 108
                            9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-2451109IPR009057Homeodomain-like
SuperFamilySSF466894.48E-1252109IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-1754110IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MEASKGGDGS SGASASNDDS TVEEEGAGRE EQEDACRGNS LSSSSVRPYV RSKNPRLRWT  60
PELHHCFVRA XXXXXXXXXA TPKLVLQLMN VRGLSIGHVK SHLQMYRSKK IDDSGQVIGH  120
LPLPHAFHHR QSGAGTMLSR FGAAAWPPWR SFHEPYWAHG RPFLATGSRT YNSLEAEAEA  180
AFLRSRAQHV ARAASSNPGL MMQSGCPSWN DHHTMNHQHK RLLQPTVCNA DDIHISLDLD  240
LDLSLGLPVP RREAKRKRSG CGWVKEGPDE NGADEEQVDE TSSATMLSLS LFSSGDAPRK  300
MSSTSASDRA VDEHATRRVQ Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250256RREAKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3736460.0AK373646.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3038H19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183942.10.0transcription factor LUX-like
TrEMBLA0A446SYI00.0A0A446SYI0_TRITD; Uncharacterized protein
STRINGTraes_5AL_2F93FD88F.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44083671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-30G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]