PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5AL_0684A2454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 203aa MW: 22255.4 Da PI: 8.8231 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 50.1 | 6.1e-16 | 7 | 37 | 25 | 55 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++AtPktil++m+vkgLtl h+kSHLQkYR+ Traes_5AL_0684A2454.1 7 KEATPKTILRTMGVKGLTLFHLKSHLQKYRM 37 78****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.33E-5 | 7 | 38 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.4E-14 | 7 | 38 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-10 | 7 | 38 | IPR006447 | Myb domain, plants |
Pfam | PF14379 | 4.7E-20 | 78 | 123 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MLLILSKEAT PKTILRTMGV KGLTLFHLKS HLQKYRMGKQ TGKETPEQSK DGSYLLDAQG 60 GMSLSPRVST QDAKESQEVK EALRAQMEMQ RSLHEQVEVQ KHVDIRMDAY TTYINTLLEK 120 ACKIVSEQFA SSGFSVSDQS LPELSSGGVM CGTATDALSS SVFHQLSVSS INMHSPGGKP 180 SPSGMEGQLL LQRSPEFKRK SSC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK363665 | 0.0 | AK363665.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2017P09. | |||
GenBank | AK367354 | 0.0 | AK367354.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2055J10. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020195363.1 | 1e-140 | protein PHR1-LIKE 2-like isoform X2 | ||||
Refseq | XP_020195364.1 | 1e-140 | protein PHR1-LIKE 2-like isoform X2 | ||||
Refseq | XP_020195365.1 | 1e-140 | protein PHR1-LIKE 2-like isoform X2 | ||||
Refseq | XP_020195366.1 | 1e-140 | protein PHR1-LIKE 2-like isoform X2 | ||||
Refseq | XP_020195367.1 | 1e-140 | protein PHR1-LIKE 2-like isoform X2 | ||||
Swissprot | Q94A57 | 2e-41 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | A0A446T1N6 | 1e-142 | A0A446T1N6_TRITD; Uncharacterized protein | ||||
STRING | Traes_5AL_0684A2454.1 | 1e-147 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3427 | 38 | 73 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 2e-43 | G2-like family protein |
Publications ? help Back to Top | |||
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