PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4DL_68FD80D58.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 454aa    MW: 50579 Da    PI: 4.6435
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4DL_68FD80D58.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM26.61.7e-0847154128
                    NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            + + +yfF+k+ +  ++++   +   +  W+++  +++++  +g l g+k+t+++y + ++++++tdW +h y +
  Traes_4DL_68FD80D58.2   4 DGHALYFFHKKVNLDNNEND--K---DISWQKSAPSRSIIL-DGGLRGCKETFALY-AFKNSPRRTDWELHRYYI 71 
                            45678****99887654333..3...335************.999***********.5667779********975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.393189IPR003441NAC domain
SuperFamilySSF1019416.02E-9489IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MRQDGHALYF FHKKVNLDNN ENDKDISWQK SAPSRSIILD GGLRGCKETF ALYAFKNSPR  60
RTDWELHRYY IKNIMENEGE LVLSKVFYKS QKGHCECAAK ASLQSAQDNS VTDDDSREEK  120
EDTQLEKLSV NMATESNFVE GNGNNQEQML VEMYPDQDKP CSLKHVLDTA DVNHENQIND  180
QAETELDHMS LQDRYRILLA DMRSCSARAS AEKCALNDMG NSSMQMDAET SGPVPKSEID  240
EINHEGTAYR ECSVNGKEIP VEDTEGPVND KAFNSSAELL LSQTPACGDE NVQLAPRNSG  300
TYLVDVKTEP ALDGYAIYPS DSPVKFHHSN NDGLKVSGSI LECVPKDAED SLPSLGVKSE  360
LSGYELPGLC ENSFISSMEP IVKKLHTRTL NCNGGLAPCS RQRKKRDSSE KVLEEDGYKN  420
DEGIPYPSRQ KRKKKTATDS IETALEEDAP GLLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3724600.0AK372460.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3002I07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020153315.10.0uncharacterized protein LOC109738630 isoform X2
TrEMBLA0A453IML90.0A0A453IML9_AEGTS; Uncharacterized protein
STRINGTraes_4DL_68FD80D58.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74793239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.15e-13NAC domain containing protein 75
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]