PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4DL_61AE80723.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 332aa    MW: 35876.6 Da    PI: 5.2357
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4DL_61AE80723.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.4e-112572971055
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            ++RR++iN+++  L+ l+P+      +K++ +++Le+Av+YIk +q
  Traes_4DL_61AE80723.1 257 QKRREKINERLKVLQNLIPNG-----TKVDISTMLEEAVHYIKFMQ 297
                            89*****************97.....8****************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.09247296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-10252302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-12256310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-11257301No hitNo description
PfamPF000104.4E-8257297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-12257306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MESSEASWHS FDPSVAAEDS EEMARLLGVQ FFGNEQKQHP AAAPPSSMYW PGQEAADQYY  60
TSAPYCMQMQ EHASAGAGYY SHGYYDGDAT AMAGNFFVAP EEQIMADPAG FMVDLNLQFD  120
DQDDGADTSA AACKRKFGDQ NGTQSDTVAA PKKKARSTAP PVQRKGKSGA QPKKASKGSC  180
SRGAQEENNG EANNNVQSSS NYLSDEEGSL EMTSCSNMSS ASKKTSSSRG DHGLGGGAKA  240
RAGRGAATDP QSLYARQKRR EKINERLKVL QNLIPNGTKV DISTMLEEAV HYIKFMQLQI  300
KLLSSDDMWM FAPIAYNGFN VGLDLKIAPP QQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150156PKKKARS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163011.10.0transcription factor bHLH85-like
TrEMBLA0A453IQ210.0A0A453IQ21_AEGTS; Uncharacterized protein
STRINGTraes_4DL_61AE80723.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116802832
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-43bHLH family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]