PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4DL_2C27C34AF.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 419aa MW: 45129.4 Da PI: 9.3851 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107 | 1e-33 | 344 | 398 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fv+ v++LGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+ Traes_4DL_2C27C34AF.2 344 KQRMRWTPELHECFVDSVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 398 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.796 | 341 | 401 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.8E-31 | 342 | 400 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.58E-17 | 343 | 398 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.4E-25 | 344 | 398 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.0E-8 | 346 | 397 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
ATHHPSRPSW PHGGRRGLSA KSRAHGAVGV RGAPPPGNWW ASSSSCAHQV PPPSLSSSIP 60 APSVATHRPS QNSPLLSSPP PKAAPIQQLP HNPTQEHIKI NLWERRNACP QFLMRRCDLR 120 QSHNSRVSGG MSSSLPILPN SLKETFHGPY NPQLTPMQRQ LTSDLVPLHQ SALPSATLHP 180 RAGAMRSSYA ASLGYSPNPL DSAPNHERQS MVAPFAPQPS DIEVFQTLSN NIPGGHTGAT 240 WFPGSADGLS DYGDNIPASG SQIQNGGPAV TSDVVAKQNE WWAEIMNDDW RDILDATAAD 300 PQSKSMVQPS NSAASQPAVN QPASSHGGEI CNVASPPNSN SAAKQRMRWT PELHECFVDS 360 VNKLGGSEKA TPKGVLKLMK VDGLTIYHVK SHLQKYRTAR YKPDLMEGTA EKRTTTEEL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-29 | 343 | 402 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK357597 | 0.0 | AK357597.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1057F14. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020173453.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
Swissprot | B8ANX9 | 1e-121 | PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1 | ||||
TrEMBL | A0A453I6J4 | 0.0 | A0A453I6J4_AEGTS; Uncharacterized protein | ||||
STRING | Traes_4DL_2C27C34AF.2 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1971 | 37 | 89 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 2e-39 | phosphate starvation response 1 |
Publications ? help Back to Top | |||
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