PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BS_EC11C40EC.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 91aa MW: 10090.7 Da PI: 7.6793 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 71.8 | 1.3e-22 | 1 | 82 | 132 | 217 |
GRAS 132 LasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldes 217 +a+R+ ++p+++RiTgvgs s++el+ t rLa++A lg+ fef++ +++rle ++l++L+vk gE ++ n+vl+ hrll+++ Traes_4BS_EC11C40EC.1 1 MATRTlQPPAHVRITGVGS----SRQELQDTSARLAHVAVGLGLAFEFHT-LVDRLEYVRLWMLHVKCGEHVVMNCVLAAHRLLRDE 82 6899967777*********....9**************************.6*******************************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03514 | 4.6E-20 | 1 | 82 | IPR005202 | Transcription factor GRAS |
PROSITE profile | PS50985 | 14.084 | 1 | 91 | IPR005202 | Transcription factor GRAS |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence Send to blast |
MATRTLQPPA HVRITGVGSS RQELQDTSAR LAHVAVGLGL AFEFHTLVDR LEYVRLWMLH 60 VKCGEHVVMN CVLAAHRLLR DETGGALSDF L |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that acts as positivie regulator of brassinosteroid (BR) signaling (PubMed:19220793, PubMed:22685166). Functions downstream of BRI1 and GSK2 to modulate BR responses. Acts as a direct target of GSK2 kinase to mediate BR responses (PubMed:22685166). Involved in feedback inhibition of BR biosynthetic genes. Repressed by BZR1 (PubMed:19220793). {ECO:0000269|PubMed:19220793, ECO:0000269|PubMed:22685166}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269|PubMed:19220793}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020158067.1 | 7e-47 | scarecrow-like protein 28 | ||||
Swissprot | Q9LWU9 | 7e-30 | DLT_ORYSJ; Protein DWARF AND LOW-TILLERING | ||||
TrEMBL | A0A3B6TCL4 | 2e-45 | A0A3B6TCL4_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453QHM2 | 2e-45 | A0A453QHM2_AEGTS; Uncharacterized protein | ||||
STRING | Traes_4BS_EC11C40EC.1 | 2e-60 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6404 | 34 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63100.1 | 1e-29 | GRAS family protein |