PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BS_C0031D503.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 140aa MW: 15915.4 Da PI: 8.5734 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 60.7 | 3.1e-19 | 34 | 88 | 4 | 55 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55 lrWt +LH+ F+eave GG+ + P ++ +e+m+v gLt+ ++kSHLQ+YR Traes_4BS_C0031D503.1 34 LRWTGDLHKIFLEAVEYQGGPYEVKPTAVkekMEAMGVTGLTIWNIKSHLQRYRE 88 89************************88844467889*****************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.17E-11 | 29 | 89 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.1E-17 | 33 | 89 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.9E-15 | 34 | 89 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MSNGKPTYNS DSSYMSSIPV CCFLRAMQPT SSLLRWTGDL HKIFLEAVEY QGGPYEVKPT 60 AVKEKMEAMG VTGLTIWNIK SHLQRYREKC NLGPEPPRDV RGTASPRKAG DGVYGSLMQW 120 NCWICMPLCS LFIYLYFRTD |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020181145.1 | 4e-69 | protein PHR1-LIKE 3-like isoform X3 | ||||
TrEMBL | A0A446RSG0 | 1e-102 | A0A446RSG0_TRITD; Uncharacterized protein | ||||
STRING | Traes_4BS_C0031D503.1 | 1e-102 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15499 | 12 | 16 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.1 | 1e-14 | G2-like family protein |
Publications ? help Back to Top | |||
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