PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_4BL_A0C5E3DD0.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 270aa MW: 30032.7 Da PI: 9.4504

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_4BL_A0C5E3DD0.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	118.7	5.5e-37	4	105	28	128
NAM 28 leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgra 113 l++ ++i +++iy+++PwdLp + k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+ ++++glkktLvfy+gra Traes_4BL_A0C5E3DD0.1 4 LHF-DIIGTLNIYRHDPWDLPGRXKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSTadPKRVIGLKKTLVFYQGRA 90 455.7899***********99999************************************98777788********** PP NAM 114 pkgektdWvmheyrl 128 p+g+ktdWvm+eyrl Traes_4BL_A0C5E3DD0.1 91 PRGTKTDWVMNEYRL 105 ***********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	45.415	1	125	IPR003441	NAC domain
SuperFamily	SSF101941	7.32E-45	2	125	IPR003441	NAC domain
Pfam	PF02365	4.0E-15	23	105	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
GKKLHFDIIG TLNIYRHDPW DLPGRXKIGE REWYFFVPRD RKAGSGGRPN RTTERGFWKA 60 TGSDRAIRST ADPKRVIGLK KTLVFYQGRA PRGTKTDWVM NEYRLPDSGA APPQEDTVLC 120 KVYRKATPLK ELEQRAFEME EMKQRSGGNG GYGYSGAARA CPPPVPAAGD FYLSPSDDVQ 180 DNFLIPSSSS SSSVALSGNS SCHDALRVAK KEADVATVTV VSMSSLSKAA NAPFHLQLPA 240 FDWLNDPFLT QLRSPWQDQH CMSPYAHLLY

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	7e-37	1	127	41	167	NO APICAL MERISTEM PROTEIN
1ut4_B	7e-37	1	127	41	167	NO APICAL MERISTEM PROTEIN
1ut7_A	7e-37	1	127	41	167	NO APICAL MERISTEM PROTEIN
1ut7_B	7e-37	1	127	41	167	NO APICAL MERISTEM PROTEIN
3swm_A	7e-37	1	127	44	170	NAC domain-containing protein 19
3swm_B	7e-37	1	127	44	170	NAC domain-containing protein 19
3swm_C	7e-37	1	127	44	170	NAC domain-containing protein 19
3swm_D	7e-37	1	127	44	170	NAC domain-containing protein 19
3swp_A	7e-37	1	127	44	170	NAC domain-containing protein 19
3swp_B	7e-37	1	127	44	170	NAC domain-containing protein 19
3swp_C	7e-37	1	127	44	170	NAC domain-containing protein 19
3swp_D	7e-37	1	127	44	170	NAC domain-containing protein 19
3ulx_A	8e-37	1	125	39	168	Stress-induced transcription factor NAC1
4dul_A	7e-37	1	127	41	167	NAC domain-containing protein 19
4dul_B	7e-37	1	127	41	167	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK367963	0.0	AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020190294.1	1e-161	NAC domain-containing protein 72-like
Swissprot	Q10S65	1e-121	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A446TN47	1e-179	A0A446TN47_TRITD; Uncharacterized protein
STRING	Traes_4BL_A0C5E3DD0.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	4e-71	NAC domain containing protein 36

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]