PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_A0C5E3DD0.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 270aa    MW: 30032.7 Da    PI: 9.4504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_A0C5E3DD0.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM118.75.5e-37410528128
                    NAM  28 leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgra 113
                            l++ ++i +++iy+++PwdLp + k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+   ++++glkktLvfy+gra
  Traes_4BL_A0C5E3DD0.1   4 LHF-DIIGTLNIYRHDPWDLPGRXKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSTadPKRVIGLKKTLVFYQGRA 90 
                            455.7899*************99999****************************************98777788************** PP

                    NAM 114 pkgektdWvmheyrl 128
                            p+g+ktdWvm+eyrl
  Traes_4BL_A0C5E3DD0.1  91 PRGTKTDWVMNEYRL 105
                            *************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100545.4151125IPR003441NAC domain
SuperFamilySSF1019417.32E-452125IPR003441NAC domain
PfamPF023654.0E-1523105IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
GKKLHFDIIG TLNIYRHDPW DLPGRXKIGE REWYFFVPRD RKAGSGGRPN RTTERGFWKA  60
TGSDRAIRST ADPKRVIGLK KTLVFYQGRA PRGTKTDWVM NEYRLPDSGA APPQEDTVLC  120
KVYRKATPLK ELEQRAFEME EMKQRSGGNG GYGYSGAARA CPPPVPAAGD FYLSPSDDVQ  180
DNFLIPSSSS SSSVALSGNS SCHDALRVAK KEADVATVTV VSMSSLSKAA NAPFHLQLPA  240
FDWLNDPFLT QLRSPWQDQH CMSPYAHLLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-37112741167NO APICAL MERISTEM PROTEIN
1ut4_B7e-37112741167NO APICAL MERISTEM PROTEIN
1ut7_A7e-37112741167NO APICAL MERISTEM PROTEIN
1ut7_B7e-37112741167NO APICAL MERISTEM PROTEIN
3swm_A7e-37112744170NAC domain-containing protein 19
3swm_B7e-37112744170NAC domain-containing protein 19
3swm_C7e-37112744170NAC domain-containing protein 19
3swm_D7e-37112744170NAC domain-containing protein 19
3swp_A7e-37112744170NAC domain-containing protein 19
3swp_B7e-37112744170NAC domain-containing protein 19
3swp_C7e-37112744170NAC domain-containing protein 19
3swp_D7e-37112744170NAC domain-containing protein 19
3ulx_A8e-37112539168Stress-induced transcription factor NAC1
4dul_A7e-37112741167NAC domain-containing protein 19
4dul_B7e-37112741167NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3679630.0AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190294.11e-161NAC domain-containing protein 72-like
SwissprotQ10S651e-121NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A446TN471e-179A0A446TN47_TRITD; Uncharacterized protein
STRINGTraes_4BL_A0C5E3DD0.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.14e-71NAC domain containing protein 36
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]