 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_4BL_86941BB78.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
GRAS |
| Protein Properties |
Length: 458aa MW: 51784.3 Da PI: 8.045 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_4BL_86941BB78.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 328 | 1.8e-100 | 77 | 448 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
++lL++cAeav+s+d a++lL+r++ ++sp+gd+ qRla+yf+++L+arla+++s++y++l ++ts +e + a+++ +s
Traes_4BL_86941BB78.1 77 ETLLVRCAEAVASNDVCGASKLLERIKYHSSPTGDARQRLAHYFAQGLEARLAGTGSRMYRSLMGKRTS---AVELIRAYHVHTAASC 161
789************************************************************999998...9*************** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvp 175
+k++ l ++I++av+g +++Hi+ ++is G+QWp Ll+ La+R++gpp+++iTg++ p++g + +ee g+rL+++A+++gvp
Traes_4BL_86941BB78.1 162 SIKVGLLFSTHTIYKAVAGRRKLHIVHYGISTGIQWPDLLRLLANREGGPPQVKITGINTPQPGpcPAALMEEAGHRLNNYASQFGVP 249
****************************************************************999999****************** PP
GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
fef++ +a++led++ e+L+++p+E+l+V++ ++ +l+des++++ +rd vL+++++++P v+v + + ++++ F++rf +al
Traes_4BL_86941BB78.1 250 FEFRA-IASKLEDVRAEDLHIDPDEVLVVSSLYEFRTLMDESLTSDMlsPRDMVLNTIRKMRPSVFVSSVVNGPYSAAFFMTRFRHAL 336
*****.7**********************************99887666*************************************** PP
GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgy 349
+y++alfd +e+++pr+s++r vEr +++r++ n +acega+r+er +++++W++r ++aG++++pl+ +++ k +++ + + +
Traes_4BL_86941BB78.1 337 YYFTALFDVMETTIPRDSDKRLLVERDIFARSAINRIACEGADRVERPQNYKEWQMRNQRAGLRQLPLDPDIVLMLKDEVKNRYHKHF 424
************************************************************************************999* PP
GRAS 350 rveeesgslvlgWkdrpLvsvSaW 373
++ e++ +l++gWk+r L++ S W
Traes_4BL_86941BB78.1 425 MICEDHRWLLQGWKGRVLYAHSTW 448
************************ PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MVVLHSATAL EEEEEEAEAT ALEMLDRLIL NGCEACPSEM QEVVRVTWED KEDKAARQSI 60
SRRGRRGARH TVVTDLETLL VRCAEAVASN DVCGASKLLE RIKYHSSPTG DARQRLAHYF 120
AQGLEARLAG TGSRMYRSLM GKRTSAVELI RAYHVHTAAS CSIKVGLLFS THTIYKAVAG 180
RRKLHIVHYG ISTGIQWPDL LRLLANREGG PPQVKITGIN TPQPGPCPAA LMEEAGHRLN 240
NYASQFGVPF EFRAIASKLE DVRAEDLHID PDEVLVVSSL YEFRTLMDES LTSDMLSPRD 300
MVLNTIRKMR PSVFVSSVVN GPYSAAFFMT RFRHALYYFT ALFDVMETTI PRDSDKRLLV 360
ERDIFARSAI NRIACEGADR VERPQNYKEW QMRNQRAGLR QLPLDPDIVL MLKDEVKNRY 420
HKHFMICEDH RWLLQGWKGR VLYAHSTWAA GDPTGSLV
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK375062 | 0.0 | AK375062.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3084L15. |
