PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BL_4C9A415F3.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 220aa MW: 24216.8 Da PI: 10.0053 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.2 | 9.6e-15 | 150 | 192 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r +r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++L++ Traes_4BL_4C9A415F3.1 150 RRKKRMIKNRESAARSRARKQAYTNELENKISRLEEENEQLRS 192 6899*************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.8E-15 | 145 | 192 | No hit | No description |
SMART | SM00338 | 3.6E-12 | 146 | 218 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.369 | 148 | 192 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.06E-11 | 150 | 192 | No hit | No description |
CDD | cd14707 | 6.49E-21 | 150 | 191 | No hit | No description |
Pfam | PF00170 | 1.2E-12 | 150 | 192 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 153 | 168 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MGTQAMPSGG AISRQGSLCS LTLSDVEGQL HGVNLDNLLX RRTADEVWRD IHGADGGTSR 60 PRAQMTLEDF LSRPGGDAGG AHWAEQYNPP APVPGQQRHN NVGRPLPRPL GVGAGPVLDA 120 LYHDHDHDGA TMSGQKRAAV GGPGEKTVER RKKRMIKNRE SAARSRARKQ AYTNELENKI 180 SRLEEENEQL RSYKAFEPVV HCVPQQEPKN QLRRRNSASF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK361423 | 0.0 | AK361423.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1140E18. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020198083.1 | 1e-151 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A3B6IR57 | 1e-158 | A0A3B6IR57_WHEAT; Uncharacterized protein | ||||
STRING | Traes_4BL_4C9A415F3.1 | 1e-161 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 3e-37 | bZIP family protein |
Publications ? help Back to Top | |||
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