PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_4B8CA74B8.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 332aa    MW: 35928.8 Da    PI: 6.1735
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_4B8CA74B8.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-112572971055
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            ++RR++iN+++  L++l+P+      +K++ +++Le+Av+YIk +q
  Traes_4BL_4B8CA74B8.2 257 QKRRQKINERLKVLQKLIPNG-----TKVDISTMLEEAVHYIKFMQ 297
                            89*****************97.....8****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.135247296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-10252302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-12256310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-12257306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.27E-12257301No hitNo description
PfamPF000101.8E-8257297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MESSEASWHS FDPSVVAEDS EEMARLLGVQ FFGNEQKQHP AAAPPSSMYW PGQEAADQYY  60
TSAPYCMQMQ EHASAGAGYY SHGYYDGDAT AMAGNFFVAP EEQIMADPAG FMVDLNLQFD  120
DQDDGAGTSA AACKRKFGDQ NGTQSDTVAV PKKKARSTVP PVQRKGKSSA QPKKASKGSC  180
SRGGQEESNG EANNNVQSSS NYLSDEEGSL EMTSCSNMSS ASKKTSSSRG DHGHGGGAKA  240
RAGRGAATDP QSLYARQKRR QKINERLKVL QKLIPNGTKV DISTMLEEAV HYIKFMQLQI  300
KLLSSDDMWM FAPIAYNGFN VGLDLKIAPP QQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150156PKKKARS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163011.11e-178transcription factor bHLH85-like
TrEMBLA0A446SBY10.0A0A446SBY1_TRITD; Uncharacterized protein
STRINGTraes_4BL_4B8CA74B8.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116802832
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-43bHLH family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]