PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4AL_2E26DE3F6.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 140aa MW: 14669.4 Da PI: 10.1088 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 60.8 | 2.7e-19 | 104 | 140 | 2 | 38 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 pr+rWt+ LH++Fv+av+ LGG+e+AtPk++lelm+v Traes_4AL_2E26DE3F6.2 104 PRMRWTTALHAHFVQAVQLLGGHERATPKSVLELMNV 140 9**********************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.4E-15 | 100 | 140 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.4E-6 | 101 | 140 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.9E-13 | 104 | 140 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MATAADAPDL SLHISPPSPT GKAGSGRGDE MAISAESTEL CLGFDMATAR QPGEVRNGHS 60 DLEQRLHQPS QIPRFKKSSA DSQAGSSGGA ARSGNGGKKS SRAPRMRWTT ALHAHFVQAV 120 QLLGGHERAT PKSVLELMNV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189915.1 | 4e-94 | probable transcription factor RL9 | ||||
TrEMBL | A0A446R6K1 | 1e-96 | A0A446R6K1_TRITD; Uncharacterized protein | ||||
STRING | Traes_4AL_2E26DE3F6.2 | 4e-98 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3742 | 31 | 68 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42630.2 | 1e-20 | G2-like family protein |
Publications ? help Back to Top | |||
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