PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3DS_F18F3A1A1.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 97aa    MW: 10498 Da    PI: 11.4248
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3DS_F18F3A1A1.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.47.1e-052464432
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC.............. CS
                    HLH  4 ahnerErrRRdriNsafeeLrellPkas............k 32
                             + +E++RR +++    +L +llP +s            +
  Traes_3DS_F18F3A1A1.1 24 ERKDVEKNRRLHMKGLCLKLSSLLPASSahhlrhysstssS 64
                           56899*********************766777666654440 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.0E-52254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MKSRRQSGRG GAMLPDGGCS GKMERKDVEK NRRLHMKGLC LKLSSLLPAS SAHHLRHYSS  60
TSSSPPSSNK VRKNTLDSPP KGRLICSTHA AVRGTDT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183666.14e-36uncharacterized protein LOC109769325
TrEMBLA0A453DN199e-63A0A453DN19_AEGTS; Uncharacterized protein
STRINGTraes_3DS_F18F3A1A1.11e-63(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]