PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_3DS_AB726A97D.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 36aa MW: 4362.07 Da PI: 10.1514 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.3 | 5.7e-09 | 1 | 36 | 2 | 37 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCsk 37 fYn+YA e GFsvrks+ + n+ i+ r+ vCs+ Traes_3DS_AB726A97D.1 1 FYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSR 36 9*********************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 1.0E-6 | 1 | 36 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 36 aa Download sequence Send to blast |
FYNKYALEKG FSVRKSYVEW DGSNKYIILR KIVCSR |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 3e-53 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189695.1 | 2e-17 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A446RF00 | 2e-17 | A0A446RF00_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A452XDK6 | 2e-17 | A0A452XDK6_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A452XE59 | 2e-17 | A0A452XE59_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A452XR33 | 2e-17 | A0A452XR33_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A452Z715 | 2e-17 | A0A452Z715_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A452ZPX6 | 2e-17 | A0A452ZPX6_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453DIU8 | 2e-17 | A0A453DIU8_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453DSV9 | 2e-17 | A0A453DSV9_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453IRY7 | 2e-17 | A0A453IRY7_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453IRZ1 | 2e-17 | A0A453IRZ1_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453M6J2 | 2e-17 | A0A453M6J2_AEGTS; Uncharacterized protein | ||||
STRING | Traes_1DS_E5423261A.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_3AS_9B4FF6282.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_5BS_E5423261A.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_6AS_895EC9E40.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_6DL_E5423261A.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_6DL_E5423261A1.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_7DL_E5423261A.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_7DL_E5423261A1.1 | 3e-18 | (Triticum aestivum) | ||||
STRING | Traes_7DL_E5423261A2.1 | 3e-18 | (Triticum aestivum) |
Publications ? help Back to Top | |||
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