PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3DL_663081CEA.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 834aa    MW: 94334.6 Da    PI: 7.1842
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3DL_663081CEA.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1153.45e-48161313117
                   CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 
                            +e k+rwlk++e+++iL n e + +++ +++rp+sgs++L+nr++ r+fr+DGy+w+kk++gk+ +E+he LKv++v++l+cyYa++e
  Traes_3DL_663081CEA.1  16 REvKTRWLKPREVLDILRNCELFGIQNRTPQRPPSGSWFLFNRRVHRFFRNDGYQWQKKRNGKSGNEAHEYLKVNNVKALNCYYARAE 103
                            56699*********************************************************************************** PP

                   CG-1  90 enptfqrrcywlLeeelekivlvhylev 117
                            + ptf rr+yw+Le ++e+ivlvhy++v
  Traes_3DL_663081CEA.1 104 NSPTFMRRIYWMLEPAYEHIVLVHYRDV 131
                            *************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143764.40811137IPR005559CG-1 DNA-binding domain
SMARTSM010761.3E-5414132IPR005559CG-1 DNA-binding domain
PfamPF038591.9E-4318131IPR005559CG-1 DNA-binding domain
CDDcd001020.00201307389No hitNo description
SuperFamilySSF812962.33E-11308387IPR014756Immunoglobulin E-set
PfamPF136376.8E-8511562No hitNo description
SuperFamilySSF484031.87E-14513604IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.3E-14513605IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.486514574IPR020683Ankyrin repeat-containing domain
CDDcd002041.41E-12514601No hitNo description
PROSITE profilePS5008811.114542574IPR002110Ankyrin repeat
SMARTSM000150.001699721IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525407.17E-5699749IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500968.133700729IPR000048IQ motif, EF-hand binding site
PfamPF006120.0067701721IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0079722744IPR000048IQ motif, EF-hand binding site
PfamPF006120.004724744IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.45724751IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    Send to blast
LLRKNGNGLD IQNLQREVKT RWLKPREVLD ILRNCELFGI QNRTPQRPPS GSWFLFNRRV  60
HRFFRNDGYQ WQKKRNGKSG NEAHEYLKVN NVKALNCYYA RAENSPTFMR RIYWMLEPAY  120
EHIVLVHYRD VLEGSISVSA LNGSPTSYQN GSASRADAHS SPGLTSEIIA PRLLSRSPGS  180
AEEVSSQILT INNESNDTSQ FDWRRMLEMQ LSLENKERHD VNTGEVLPNH DPNPMPGIQN  240
EEFDTGTNLA DIFYELEEFS EDNRTEGSQP YRDPIDVIRN SAWLEEDQLN SFLHSAPVTV  300
DENQWFHIHE VSPEWAFCSE SAKVVIAGDF PSNILWVLFG DVKVPAEIVQ QGVIRCYTPS  360
YLGAGKVRMC MLDENGKPCT QDREFGFVEK PTNTMIIGNG KPYSEAREFE FQQRPTKSDN  420
ELLLLLNYVQ MLFDSHGCEL FSKFRLPLPN VQSGFPVNPS EIIGRTCEQL DHENAVNCIM  480
EVMLNSKFED WLSSKFEQNS EGEYLLPKQY HGVIHTIAAL GYDWALKPLL NNGVPINYRD  540
ANGWTALHWA ARFGRQQMVA VLFAAGAAVG ALSDPTAEDP AAKTPASIAS AYGFIGISAF  600
LSEAELTSTL HSLESQENGK PVDHNGGVST SSAVDRVSDK CAHVDGGTDD QLALRDSLGA  660
IRNAVQAAGC IQATFRVFSL KKKKQKALQN GDSSASPSML ERAALSIQKN FRCWKKRKEY  720
QKVRKNVIKI QARFRAHRER NKYKELLQSV GILEKIMLRW FRKGVGLRGI NSRAMPIDQD  780
EEEDIVKVFR KERVETAVSE AVSRVSAIVG CPVARLDYRR MLEWHQQAKI GHGK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC6866960.0KC686696.1 Triticum aestivum calmodulin-binding transcription activator 4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189402.10.0calmodulin-binding transcription activator 4-like isoform X1
TrEMBLA0A453GCP60.0A0A453GCP6_AEGTS; Uncharacterized protein
STRINGTraes_3DL_663081CEA.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94073440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16940.12e-97calmodulin binding;transcription regulators
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]