PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_3AS_5A6A80EA5.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

BES1

Protein Properties

Length: 325aa MW: 34225.2 Da PI: 7.0912

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_3AS_5A6A80EA5.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	32.2	3.6e-10	58	135	71	149
DUF822 71 kgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149 +g++p e+++ +g+s s sp+ss+q +sp++sy+asp+sssfps +s+ +++++++ + +lp+l++ s++++s Traes_3AS_5A6A80EA5.1 58 QGCRPAERMDGIGCSVSPSPCSSYQ--------PSPRASYNASPTSSSFPSGASSPFLPHSNNmvngvdaTPILPWLQTFSNSTAS 135 8************************........99999999999999999999999999988889998889999999999887766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.6E-11	58	129	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence Send to blast
MLLSRYQFCR NTASGLLSAS RRESSDANNV LVFCTLKCCS VGSNFAAETN NVFVICSQGC 60 RPAERMDGIG CSVSPSPCSS YQPSPRASYN ASPTSSSFPS GASSPFLPHS NNMVNGVDAT 120 PILPWLQTFS NSTASNKRPH LPPLLIHGGS ISAPVTPPLS SPTARTPRMK TDWDESVIQP 180 PWHGSNSPCV VNSTPPSPGR QMVPDPAWLA GIQISSTSPS SPTFSLMSSN PFSVFKEAIP 240 GGGSSRMCTP GQSGTCSPVI PGMARHPDVH MMDVVSDEFA FGSSTNGGAQ QATAGLVRAW 300 EGERIHEDSG SDELELTLGS SRTRS

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020188462.1	0.0	protein BZR1 homolog 2
Swissprot	Q0JPT4	1e-135	BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBL	A0A446N903	0.0	A0A446N903_TRITD; Uncharacterized protein
STRING	Traes_3AS_5A6A80EA5.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-50	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148]