PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3AL_64D802655.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 330aa    MW: 35681.2 Da    PI: 8.2006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3AL_64D802655.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000262022391254
                            HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            R +++ +++  L++l+ +      +K + a++L +A eYIk L
  Traes_3AL_64D802655.2 202 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 239
                            677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.874190239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-7200248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-10200250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.35E-4200244No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MDWTHAFLSG RSDASFQAVL QDDMPASMTT RPLFRAHQPA VDEAVMSNPF RDMSHSFSLL  60
DQVPAASSPY GTAPLQGMFD NAGASRNVSV LGECQSSTSY DGTAAMQLNQ AATQMLGGGA  120
QLQYLSGSGG YLPFGGAPLS SQLLLQALQP KTSYSSSSNT LMAKFAEHAC SPPVRRSEPD  180
SPAAAKRPRI EAPSPLPTFK VRKEKLGDRI TALQQLVSPF GKTDTASVLH EANEYIKFLH  240
DQVASLTYPY LKNVNPLQQF QQKGSENAKD DGGEPKKDLR SRGLCLVPVA TTYTVASETV  300
PEFWYPTFGG TFRLQTNTVL RLKQSKGACC
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181117.10.0transcription factor UNE12-like isoform X2
TrEMBLA0A3B6EJL80.0A0A3B6EJL8_WHEAT; Uncharacterized protein
STRINGTraes_3AL_64D802655.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29703464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.35e-47bHLH family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]