PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_5C8D8DACA.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 78aa    MW: 8470.41 Da    PI: 8.5372
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_5C8D8DACA.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.7e-0722631454
                           HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                    HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                           d+i + +++L+ llP+ + ++++ + s a +L++++ YI+sL
  Traes_2DL_5C8D8DACA.1 22 DQISELLSKLQALLPEsQARNGAHRGSAARVLQETCSYIRSL 63
                           6899************666888888***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.163863IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.68E-82276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-52263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.4E-82267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
MSSSSRRSRT RSAGSSPSIS EDQISELLSK LQALLPESQA RNGAHRGSAA RVLQETCSYI  60
RSLHREVDDL SETLAALL
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination (By similarity). {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination. {ECO:0000269|PubMed:20009022}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By epibrassinolide. {ECO:0000269|PubMed:20009022}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3732871e-100AK373287.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3026B22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020185346.11e-47transcription factor ILI1-like
SwissprotA2XY473e-32ILI1_ORYSI; Transcription factor ILI1
SwissprotQ7X7423e-32ILI1_ORYSJ; Transcription factor ILI1
TrEMBLA0A3B6DMJ83e-46A0A3B6DMJ8_WHEAT; Uncharacterized protein
TrEMBLA0A453D9F93e-46A0A453D9F9_AEGTS; Uncharacterized protein
TrEMBLM8ASH33e-46M8ASH3_AEGTA; Transcription factor bHLH135
STRINGEMT043745e-47(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122932837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.12e-20activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1