PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_2DL_07E54848B.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 69aa MW: 7684.9 Da PI: 10.5438 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 46.4 | 8.9e-15 | 1 | 28 | 28 | 55 |
G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55 tPk +l+lm +kgLtl+h+kSHLQkYRl Traes_2DL_07E54848B.1 1 TPKGVLRLMAMKGLTLYHLKSHLQKYRL 28 9**************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 3.7E-9 | 1 | 29 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 1.4E-13 | 1 | 29 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.4E-5 | 1 | 31 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence Send to blast |
TPKGVLRLMA MKGLTLYHLK SHLQKYRLGK QSKKSTDLEL ANSGDFTTQD INFQIGAPLV 60 VPAERDTGR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK371512 | 8e-71 | AK371512.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2136B23. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020164352.1 | 2e-42 | myb family transcription factor PHL11-like | ||||
TrEMBL | A0A1D5UMM0 | 4e-41 | A0A1D5UMM0_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453CUW9 | 4e-41 | A0A453CUW9_AEGTS; Uncharacterized protein | ||||
TrEMBL | N1QYN5 | 7e-41 | N1QYN5_AEGTA; Myb family transcription factor APL | ||||
STRING | EMT16225 | 1e-41 | (Aegilops tauschii) | ||||
STRING | Traes_2DL_07E54848B.1 | 4e-44 | (Triticum aestivum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 9e-14 | G2-like family protein |
Publications ? help Back to Top | |||
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