 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_2BS_FDABA21A7.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
GRAS |
| Protein Properties |
Length: 505aa MW: 54570.6 Da PI: 5.9831 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_2BS_FDABA21A7.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 301 | 2.9e-92 | 112 | 502 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalkl..fs 85
++lL++cA+a++++d++l+q++L+ l+++a dgd++qRl+a f+ AL ar +r ++ + +a+++ +s ++++++a++l f+
Traes_2BS_FDABA21A7.1 112 EQLLVHCANAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVARASRtgACKAVTAAVAAAVESAALHVHRFTAVELasFV 199
79***************************************************943444555555444444444777777777789** PP
GRAS 86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfA 169
+++P+++f++++aN+aIleaveg + vH++D++ ++++Q p+L++ LasR+egpp lR+T+ + sg ++ e+g +L +fA
Traes_2BS_FDABA21A7.1 200 DLTPWHRFGYMAANHAILEAVEGFSVVHVVDLSTTHCMQIPTLIDMLASRAEGPPILRLTVADVGCSGpppaLDMSYDELGAKLVNFA 287
************************************************************888766667666788899********** PP
GRAS 170 eelgvpfefnvl.......vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveq 244
++ +v+++f+++ ++ +++l++++L + Eal+ n+++ lh+++de++ + s r+ +Lk +++l P++vvv+e+
Traes_2BS_FDABA21A7.1 288 RSRNVTMDFRMVptspadaFTSLVDQLRVQQLVSDGTEALILNCHMLLHTVPDETAGSVSltqsvsLRTMLLKSIRTLDPTLVVVAEE 375
************888666555566777888887777****************9987666655466678899***************** PP
GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
+ad ++++ + r+ a+++ + +d++++ lp+ se+r+++E+e +g++++nv+a+eg +r+er+e ++W +r++ aGF++v+++e+
Traes_2BS_FDABA21A7.1 376 DADFTAGDVVGRLRAAFNFLWIPYDAVDTFLPKGSEQRRWYEAE-VGWKVENVLAQEGVDRVERQEDRARWGQRMRGAGFRAVAFGEE 462
********************************************.******************************************* PP
GRAS 333 aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
aa +++++l++++ g+ ++ e++ l+l+Wk++++v++SaW
Traes_2BS_FDABA21A7.1 463 AAGEIRTMLNEHA-AGWGMKREDDDLMLTWKGHNVVFASAW 502
*************.889999********************* PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 505 aa
Download sequence Send
to blast |
MPCTSTKSAP QTAGRVLALP LCSFLIIAAA SQICCLPFHP PRDPPYMMQF THAAVTAPPL 60
YPNGHHGLGL GLFLDVGAPR ARPWPAAGSL FPTLPPSSKI SLGNLNSAGC MEQLLVHCAN 120
AIEANDATLT QQILWVLNNI APADGDSNQR LTAAFLCALV ARASRTGACK AVTAAVAAAV 180
ESAALHVHRF TAVELASFVD LTPWHRFGYM AANHAILEAV EGFSVVHVVD LSTTHCMQIP 240
TLIDMLASRA EGPPILRLTV ADVGCSGPPP ALDMSYDELG AKLVNFARSR NVTMDFRMVP 300
TSPADAFTSL VDQLRVQQLV SDGTEALILN CHMLLHTVPD ETAGSVSLTQ SVSLRTMLLK 360
SIRTLDPTLV VVAEEDADFT AGDVVGRLRA AFNFLWIPYD AVDTFLPKGS EQRRWYEAEV 420
GWKVENVLAQ EGVDRVERQE DRARWGQRMR GAGFRAVAFG EEAAGEIRTM LNEHAAGWGM 480
KREDDDLMLT WKGHNVVFAS AWAPS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK362740 | 0.0 | AK362740.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2009M24. |
