PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BL_E2B676D40.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 96aa    MW: 10408.7 Da    PI: 8.5371
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BL_E2B676D40.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-0723631554
                           HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                    HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                           +i + +++L+ llP+ + ++++ + s a +L+++++YI+sL
  Traes_2BL_E2B676D40.1 23 QISELLSKLQALLPEsQARNGAHRGSAARVLQETCNYIRSL 63
                           7999***********666888888***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.08863IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-82279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-72380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-42363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
MSSSSRRSRT RRAGSSPSIS EEQISELLSK LQALLPESQA RNGAHRGSAA RVLQETCNYI  60
RSLHREVDDL SETLAALLAS DAVTAEQAAV IRSLLM
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination (By similarity). {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination. {ECO:0000269|PubMed:20009022}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By epibrassinolide. {ECO:0000269|PubMed:20009022}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3732871e-124AK373287.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3026B22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020185346.13e-48transcription factor ILI1-like
SwissprotA2XY475e-40ILI1_ORYSI; Transcription factor ILI1
SwissprotQ7X7425e-40ILI1_ORYSJ; Transcription factor ILI1
TrEMBLA0A3B6CHI62e-59A0A3B6CHI6_WHEAT; Uncharacterized protein
STRINGTraes_2BL_E2B676D40.14e-60(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26753378
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.19e-20bHLH family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]