PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_2BL_A89BDB407.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CAMTA | ||||||||
Protein Properties | Length: 1127aa MW: 125120 Da PI: 5.4382 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 172.3 | 6.9e-54 | 119 | 234 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +e k+rwlk++e++ iL n+e+ ++t+e++++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e Traes_2BL_A89BDB407.2 119 REaKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGE 206 4559************************************************************************************ PP CG-1 90 enptfqrrcywlLeeelekivlvhylev 117 +np fqrrc+w+Le ++++ivlv+y+ev Traes_2BL_A89BDB407.2 207 QNPYFQRRCFWMLEPAYDHIVLVQYREV 234 **************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 76.685 | 114 | 240 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.7E-69 | 117 | 235 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 2.0E-46 | 120 | 233 | IPR005559 | CG-1 DNA-binding domain |
CDD | cd00102 | 0.00857 | 553 | 637 | No hit | No description |
SuperFamily | SSF81296 | 1.02E-15 | 554 | 636 | IPR014756 | Immunoglobulin E-set |
Gene3D | G3DSA:2.60.40.10 | 6.9E-7 | 554 | 644 | IPR013783 | Immunoglobulin-like fold |
Pfam | PF01833 | 1.9E-7 | 554 | 635 | IPR002909 | IPT domain |
Gene3D | G3DSA:1.25.40.20 | 1.6E-15 | 746 | 840 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 4.04E-15 | 747 | 842 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 15.777 | 748 | 840 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 2.41E-9 | 753 | 840 | No hit | No description |
Pfam | PF12796 | 1.9E-6 | 763 | 841 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50088 | 11.167 | 781 | 813 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 9.9E-5 | 781 | 810 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 33 | 901 | 923 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.218 | 902 | 931 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 8.23E-7 | 948 | 1007 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PROSITE profile | PS50096 | 8.352 | 961 | 989 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 6.9 | 961 | 981 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.003 | 962 | 980 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 8.8E-6 | 982 | 1004 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 10.42 | 983 | 1011 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 3.6E-5 | 984 | 1004 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1127 aa Download sequence Send to blast |
RVSFSALILE SRNGRKEPSR SPLHLGSQQL LFPSCVPAVA LFWERTLGAI LPPHPSPSTS 60 SISAFTHLLP YCFSSCLFGV GASISWSSRP TPSFHESFEA AGSPQVTMSQ SFDINVLLRE 120 AKSRWLKPSE VYYILLNHEQ LQITHEPPNK PPSGALFLYN RRVNRFFRKD GYAWRRKKDG 180 RTVGEAHERL KVGNIDALSC YYAHGEQNPY FQRRCFWMLE PAYDHIVLVQ YREVAEGRYY 240 STLSNGSAGS LSTLSYPNDI HGKHGSTSDF SEGNESHQSS VTEVSSYSAN KEENHDSGVL 300 LSIPELQQST VMGIPELDQS SLERSSEFCM VNNNDSTNTS GLNQALKSIA EQLSLGDDDY 360 IYINQARSLD FTTNTEAADV QGNQTSNSLG DDEANQIRPE GAHGVGRGIS SSWENVLQSD 420 LGLPASSTYQ FGAHYQQSSE YQPPGGLDSS NLQLQISAAK RFLLGSEDPI DSPSYIPRDE 480 GINGINTLSA HDSSLESCLN PDWHRTTPVT LQSSLYQSNS CGYEISEFFD NGQFEPSSEE 540 DTRLTVKQKQ QFSIREISPE WAFCYEVTKV IITGDFLCDP SNICWAVMFG DTEVPVEIVQ 600 PGVLRCHTPL HSAGKLTLCI TTGNRKVCSE IKDFEFRAKS TASSFIDFAP SSMKSTEELS 660 LLAKFARILL CDNGSSAASG DDPQPGQSPK LKMNEDNWQR LINELDVGCE NPLSRVDWIM 720 EELLKSKLQQ WLSLRLQGDD GTCSLSKNEQ GIIHLISALG YDWALSSVLS AGVGINLRDS 780 NGWTALHWAA YYGREKMVAA LLAAGASAPA VTDPTAQDPV GKSAAFLASE QGHVGLAGYL 840 SEVALTSYLA SLTIEESGIS DGLAAIEAER AVESISQRSA QLHGGTEDEL SLKDSLAAVR 900 NAAQAAARIQ NAFRAFSFRR RQHKDARLKD EYGMTQEDID ELAAASRLYY QHHVSNGQFC 960 DKAAVSIQKK YRGWKGRKNF LHMRRNVVKI QAHVRGHQVR KKYKTFVSTV SVLEKVILRW 1020 RRKGHGLRGF RAEQSVMIEA EEGEEEDDDD FDDDEAVKIF RRQKVDESVK ESVSRVLSMV 1080 DSPEARMQYR RMLEEFRQAT AELGASDKAT SSILDNDLLV EIDKFTC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020147564.1 | 0.0 | calmodulin-binding transcription activator 4 isoform X1 | ||||
TrEMBL | A0A446MBR3 | 0.0 | A0A446MBR3_TRITD; Uncharacterized protein | ||||
STRING | Traes_2BL_A89BDB407.2 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6238 | 32 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22300.2 | 1e-135 | signal responsive 1 |
Publications ? help Back to Top | |||
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