PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_2AS_D0C21ADB5.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 126aa MW: 13479.6 Da PI: 9.1922 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 40.5 | 5.4e-13 | 90 | 116 | 1 | 27 |
---SS-EEEEEEE--TT-SS-EEEEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrC 27 ldDgy+WrKYGqK vk+++fprs C Traes_2AS_D0C21ADB5.1 90 LDDGYRWRKYGQKAVKNNNFPRSVNPC 116 59********************97666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.7E-14 | 75 | 116 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-11 | 82 | 117 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.365 | 85 | 126 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.6E-5 | 90 | 125 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-9 | 91 | 118 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MAGASSHDHL HHHGQAAGNN TGGGGGLGQG LFSGSKQEDP SESKDGGDDR AGSSSQGGGE 60 ADVVVGKKKG EKRERRPRFA FQTRSQVDIL DDGYRWRKYG QKAVKNNNFP RSVNPCPNFS 120 YDTLTC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF368363 | 1e-129 | EF368363.1 Triticum aestivum WRKY transcription factor (WRKY72-b) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020165705.1 | 7e-51 | probable WRKY transcription factor 75 | ||||
Swissprot | Q9C983 | 3e-20 | WRK57_ARATH; Probable WRKY transcription factor 57 | ||||
TrEMBL | A0A453A859 | 8e-62 | A0A453A859_AEGTS; Uncharacterized protein | ||||
STRING | Traes_2AS_D0C21ADB5.1 | 2e-88 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1100 | 38 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 2e-20 | WRKY DNA-binding protein 75 |
Publications ? help Back to Top | |||
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