PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_2AL_BD0C7A9A5.2

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 376aa MW: 41664.1 Da PI: 6.9257

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_2AL_BD0C7A9A5.2	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.9	2.9e-10	78	119	3	41
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 + k+ rr+++NReAAr+sR+RKka+i++Le k ++Le+e Traes_2AL_BD0C7A9A5.2 78 KEKVMRRLAQNREAARKSRLRKKAYIQQLESsriKLAQLEQE 119 56899************************9722244444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.7E-8	74	124	No hit	No description
SMART	SM00338	5.0E-6	76	136	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.22	78	122	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.1E-7	79	119	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.13E-7	80	124	No hit	No description
PROSITE pattern	PS00036	0	83	98	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	6.0E-26	179	254	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence Send to blast
MAMYERAPPQ QQHHQHQQQQ QPALGMWSSE PYKVDSGGQA TSGSSIMEPD AKFDHPGLDE 60 DPHMDELETA DQGASKPKEK VMRRLAQNRE AARKSRLRKK AYIQQLESSR IKLAQLEQEL 120 QRTRQQQGMY GGNPGTSLHR GGSAGHLGFA AAGQMMDPGV AAFEIAYGHW VDDQKRNTEE 180 LRSALQPGQG TSELELEVMV QTGLANYDNL FRVKGAAAQA DVFCVMSGLW RSPAERFFLW 240 IGGFRPSEVL KILSPQLQPM SEPQSVAVYA LQLTSAQAED ALSQGMQKLQ QTLAESLTDP 300 FAAPDAYMAG AIEKLKGLVG FVQQADHLRQ ETLQNMHRIL TTRQAAKGLL VLGDYFQRLR 360 ALSTLWAARP HESAIS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence Send to blast

MAMYERAPPQ QQHHQHQQQQ QPALGMWSSE PYKVDSGGQA TSGSSIMEPD AKFDHPGLDE  60
DPHMDELETA DQGASKPKEK VMRRLAQNRE AARKSRLRKK AYIQQLESSR IKLAQLEQEL  120
QRTRQQQGMY GGNPGTSLHR GGSAGHLGFA AAGQMMDPGV AAFEIAYGHW VDDQKRNTEE  180
LRSALQPGQG TSELELEVMV QTGLANYDNL FRVKGAAAQA DVFCVMSGLW RSPAERFFLW  240
IGGFRPSEVL KILSPQLQPM SEPQSVAVYA LQLTSAQAED ALSQGMQKLQ QTLAESLTDP  300
FAAPDAYMAG AIEKLKGLVG FVQQADHLRQ ETLQNMHRIL TTRQAAKGLL VLGDYFQRLR  360
ALSTLWAARP HESAIS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KJ596414	0.0	KJ596414.1 Triticum aestivum transcription factor TGA4 (TGA4) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020166035.1	0.0	transcription factor TGAL6-like isoform X2
Swissprot	A0A0P0WFC8	1e-148	TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBL	A0A3B6B7G6	0.0	A0A3B6B7G6_WHEAT; Uncharacterized protein
TrEMBL	A0A446LKS9	0.0	A0A446LKS9_TRITD; Uncharacterized protein
STRING	Traes_2AL_BD0C7A9A5.2	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10030.2	1e-108	TGACG motif-binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Okada A, et al. OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice. J. Biol. Chem., 2009. 284(39): p. 26510-8 [PMID:19635799] Okada K The biosynthesis of isoprenoids and the mechanisms regulating it in plants. Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25 [PMID:21737944] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Yamane H Biosynthesis of phytoalexins and regulatory mechanisms of it in rice. Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8 [PMID:23748776] Miyamoto K, et al. Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells. PLoS ONE, 2014. 9(8): p. e105823 [PMID:25157897] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]