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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_2AL_83D0D0C3F.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
LFY |
Protein Properties |
Length: 396aa MW: 43097.9 Da PI: 8.9308 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_2AL_83D0D0C3F.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 534.1 | 5.3e-163 | 1 | 380 | 1 | 385 |
FLO_LFY 1 mdpea..fsaslfkwd...praaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkd 83
mdp++ ++a+ f+wd p+ pa + + +++ a a++ rele+l+ +yGvr +tva+i+elGft+stL+ m++
Traes_2AL_83D0D0C3F.1 1 MDPNDafLAAHPFRWDlgpPA------PAAVPPPPPPPPP---PPALPPANAPRELEDLVVGYGVRASTVARISELGFTASTLLVMTE 79
777665346779****44322......2223222222222...2345566779*********************************** PP
FLO_LFY 84 eelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgea 171
+eldd++++l+ +fr+dll+Ger+G++aa+raer rl++ r++ ++ +++d +sqeg ++e++ a+sgg g+ +a
Traes_2AL_83D0D0C3F.1 80 RELDDMTAALAGLFRWDLLIGERFGLRAALRAERGRLMSPG---CRHH--GYQSGSTIDGASQEGDYPL-LSNERDGAASGGIGEDDA 161
**************************************955...5555..5677889********6554.445677888888876666 PP
FLO_LFY 172 elvaaeekkseeekkkaskkkqkrkkkkelkse.....ededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfd 254
++a+ kk+++ + +++kk++r+k kel+ + +++ ++++ e+++g g erqrehPf+vtepgevar+kknGLDYLf+
Traes_2AL_83D0D0C3F.1 162 MRMMASGKKQKNGSAARKAKKARRNKVKELRLDtqgdeHEDGGGGRSESTESSAGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFH 249
66655555544444444455777777777766644332222223345666667888899***************************** PP
FLO_LFY 255 LyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacyk 342
LyeqCr fLlqvq++ak +G+k+Ptkvtnqvfrya k+gasyinkPkmrhYvhCYalhcLde+as+alrra+k+rgenvGawrqacy+
Traes_2AL_83D0D0C3F.1 250 LYEQCRLFLLQVQSMAKLHGQKSPTKVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDALRRAYKARGENVGAWRQACYA 337
**************************************************************************************** PP
FLO_LFY 343 plvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerska 385
plv+iaar+g+didavf+ahprL+iWYvPt+LrqLCh++rs++
Traes_2AL_83D0D0C3F.1 338 PLVDIAARHGFDIDAVFAAHPRLAIWYVPTRLRQLCHQARSAH 380
****************************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 396 aa
Download sequence Send
to blast |
MDPNDAFLAA HPFRWDLGPP APAAVPPPPP PPPPPPALPP ANAPRELEDL VVGYGVRAST 60 VARISELGFT ASTLLVMTER ELDDMTAALA GLFRWDLLIG ERFGLRAALR AERGRLMSPG 120 CRHHGYQSGS TIDGASQEGD YPLLSNERDG AASGGIGEDD AMRMMASGKK QKNGSAARKA 180 KKARRNKVKE LRLDTQGDEH EDGGGGRSES TESSAGGVGG ERQREHPFVV TEPGEVARAK 240 KNGLDYLFHL YEQCRLFLLQ VQSMAKLHGQ KSPTKVTNQV FRYASKVGAS YINKPKMRHY 300 VHCYALHCLD EDASDALRRA YKARGENVGA WRQACYAPLV DIAARHGFDI DAVFAAHPRL 360 AIWYVPTRLR QLCHQARSAH DAAAAAHAGA MPPPMF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB231889 | 0.0 | AB231889.1 Triticum aestivum WFLb mRNA for FLORICAULA/LFAFY-like protein, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 2e-96 | floral meristem identity control protein LEAFY (LFY) |