PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AL_773EA7A5A.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 1122aa    MW: 124524 Da    PI: 5.4984
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AL_773EA7A5A.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11703.7e-531122273117
                   CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 
                            +e k+rwlk++e++ iL n+e+ ++t+e+ ++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e
  Traes_2AL_773EA7A5A.2 112 REaKSRWLKPSEVYYILLNHEQLQITHEPLNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGE 199
                            4559************************************************************************************ PP

                   CG-1  90 enptfqrrcywlLeeelekivlvhylev 117
                            +np fqrrc+w+Le ++++ivlv+y+ev
  Traes_2AL_773EA7A5A.2 200 QNPYFQRRCFWMLEPAYDHIVLVQYREV 227
                            **************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143775.38107233IPR005559CG-1 DNA-binding domain
SMARTSM010763.3E-68110228IPR005559CG-1 DNA-binding domain
PfamPF038591.0E-45113226IPR005559CG-1 DNA-binding domain
PfamPF018332.6E-7549630IPR002909IPT domain
Gene3DG3DSA:2.60.40.108.4E-7549640IPR013783Immunoglobulin-like fold
SuperFamilySSF812969.33E-16549631IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.201.6E-15741835IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.95E-15742837IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.804743835IPR020683Ankyrin repeat-containing domain
CDDcd002041.54E-9748835No hitNo description
PROSITE profilePS5008811.167776808IPR002110Ankyrin repeat
SMARTSM002489.9E-5776805IPR002110Ankyrin repeat
PfamPF136373.1E-5778835No hitNo description
SMARTSM0001533896918IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.218897926IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.25E-69431002IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500968.462956984IPR000048IQ motif, EF-hand binding site
SMARTSM000156.9956976IPR000048IQ motif, EF-hand binding site
PfamPF006120.003957975IPR000048IQ motif, EF-hand binding site
SMARTSM000153.0E-6977999IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.429781006IPR000048IQ motif, EF-hand binding site
PfamPF006123.6E-5979999IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1122 aa     Download sequence    Send to blast
FLNHGTEGRS RADPPLHLGS QQLPFPSCVP AIALFWERTL GAVLPPHPSP STSSISAFTH  60
LPAYCFSSCL FGVGASISWS SRPTPSFHES FEAAGSPQVT MSQSFDINVL LREAKSRWLK  120
PSEVYYILLN HEQLQITHEP LNKPPSGALF LYNRRVNRFF RKDGYAWRRK KDGRTVGEAH  180
ERLKVGNIDA LSCYYAHGEQ NPYFQRRCFW MLEPAYDHIV LVQYREVAEG RYYSTLSNGS  240
AGSLSTLSYP NDIHGKHGST SDFSEGNESH QSSVTEVSSY SANKEYNHDS GVLLSIPELQ  300
QSTVMGMPEL DQSSLERSSE FCMVNNNDST NTSGLNQALK SIAEQLSLGD DDYIYINQAR  360
SLDFTTNTEA ADVQGNQTSN SLGDDEANQI RPEGAHGVGR GISSSWENVL QSDLGLPASS  420
TYQFGAHYQQ SSEYQPPGGL DGSNLQLQIS AAKRFLLGSE DPIDSPSYNF IPRDEGINGI  480
NTLSAHDSSL ESCLNPDWQR TTPVTLQSSS YQSNSCGYEI SEFFDNGQFE PSSEEDTRLA  540
LKQKQQFSIR EISPEWAFCY EITKVIITGD FLCDPSNICW AVMFGDTEVP VEIVQPGVLR  600
CHTPLHSAGK LTLCITTGNR KVCSEIKDFE FRAKSTASSF TDFAPSSMKS TEELSLLAKF  660
ARILLCDNGS SAASGDDPQP GQSPKLKMNE DNWQRLINEL DVGCENPLSR VDWIMEELLK  720
SKLQQWLSLR LQGDDGTCSL SKNEQGIIHL ISALGYDWAL SSVLSAGVGI NLRDSNGWTA  780
LHWAAYYGRE KMVAALLAAG ASAPAVTDPT AQDPVGKSAA FLASERGHVG LAGYLSEVAL  840
TSYLASLTIE ESGISEGLAA IKAERAVESI SQRSAQLHGG TEDELSLKDS LAAVRNAAQA  900
AARIQNAFRA FSFRRRQHKD ARLKDEYGMT QEDIDELAAA SRLYYQHHVS NGQFCDKAAV  960
SIQKKYRGWK GRKNFLQMRR NVVKIQAHVR GHQVRKKYKT FVSTVSVLEK VILRWRRKGH  1020
GLRGFRAEQS VMIEAEEGEE EDDDDFEDDE AVKIFRRQKV DESVKESVSR VLSMVDSPEA  1080
RMQYRRMLEE FRQATAELGA SDKATSSILD NDLLVEINKF TC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020147564.10.0calmodulin-binding transcription activator 4 isoform X1
TrEMBLM8BQN80.0M8BQN8_AEGTA; Calmodulin-binding transcription activator 4
STRINGTraes_2AL_773EA7A5A.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62383241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-135signal responsive 1
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]