PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1BL_687A47E82.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family STAT
Protein Properties Length: 709aa    MW: 77753.9 Da    PI: 5.3402
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1BL_687A47E82.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT186.33.8e-582333541121
                   STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikf 87 
                            l+vvl+na+g+ ++kd+++vasL+yad+g++veks ddae+pLLi+++G+e+++e+rpl++lrGra+fklkisqLsskcdn+Lfri+f
  Traes_1BL_687A47E82.2 233 LEVVLTNAFGEHMNKDTQIVASLVYADNGALVEKSrDDAEPPLLIACEGLEYPAESRPLPILRGRALFKLKISQLSSKCDNKLFRIYF 320
                            79*********************************9**************************************************** PP

                   STAT  88 eipklkkypfleavskpirCisrsrntrsssltk 121
                            ++++ +kypflea skpirCisr r +r++s++k
  Traes_1BL_687A47E82.2 321 STLHTRKYPFLEASSKPIRCISRGRPSRPLSAAK 354
                            ****************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498998.62E-739184IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF555504.98E-8607689IPR000980SH2 domain
Gene3DG3DSA:3.30.505.108.8E-4607675IPR000980SH2 domain
PROSITE profilePS5000110.449611709IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    Send to blast
MAAPAEPGEI EGYLGLRDVR VELDLGKARG GGEGGAGAGG GFAVCFWLYL SGSARPSPVI  60
LHQITAGDGN KLPFLALSEG NKLLLFPLLR LHKQAPSSSN SSPWTDTTYI SAVNECPLEH  120
WIHVGCEVTE NVMRLHIDGD LVAEAHLCSL SSQPDNQDDA YQVCLLGNNG KVDGYVYNIQ  180
VLSMIGTIQE QYAENPPSKL SIDYSCCDGI EEGDDGIWCI VGGKASCRRN FMLEVVLTNA  240
FGEHMNKDTQ IVASLVYADN GALVEKSRDD AEPPLLIACE GLEYPAESRP LPILRGRALF  300
KLKISQLSSK CDNKLFRIYF STLHTRKYPF LEASSKPIRC ISRGRPSRPL SAAKRTSSAT  360
VDEIHLLNNG QGLDRDGKAN ACSLSQDQSS VACLHPSKFL KVEGDGTETH KMVSQSKQAR  420
KMVVEAQSVR TESTMSDSDS IDARSSWSGS DKDEAETLSD AMIFRYCLEG TYERSTFLKG  480
AASSINVDDL ITLANEVSLY SGCSHHRNQI LISKQLLEEG AVTWSIISKN KERALWSSAV  540
PEIMSNFMDI AHSTNRGLSE QDLEVLRGIA GCGDDLGRNE FDRLWYWLYP VAVSLSKDKI  600
NSLWGCTAPV WIEGLITTEE AENALRSSRE LLKKPGTFVL RFPTTRSWPH PDAGSLVVTY  660
VGSDNSIHHR LLSLDVSDAR AGSLQDLLLQ EPELLQLGRV DRLPTAMKY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020194163.10.0uncharacterized protein LOC109779975 isoform X2
TrEMBLA0A3B5YXI90.0A0A3B5YXI9_WHEAT; Uncharacterized protein
STRINGTraes_1BL_687A47E82.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-150SH2 domain protein B
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]