PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1BL_2DCDCD191.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TALE
Protein Properties Length: 490aa    MW: 53958 Da    PI: 11.0937
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1BL_2DCDCD191.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.51.4e-102602971954
                            HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
               Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                            Fe   ++yp+ ++++ LAk++gLt +qV++WF N R +
  Traes_1BL_2DCDCD191.2 260 FEHflHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVR 297
                            554459******************************88 PP
2BELL94.59.8e-31126195372
                   BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                            +e q +k++L+sl+eeV+krY+qy++qlq+vissFe+vagl +a+p++s+Al+++S+hF+ Lk  i +q+
  Traes_1BL_2DCDCD191.2 126 AEQQWRKTRLISLMEEVCKRYRQYYQQLQAVISSFETVAGLSNAAPFASIALRTMSKHFKYLKSTIQSQL 195
                            58899**************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.3E-877193IPR006563POX domain
PfamPF075261.3E-27122191IPR006563POX domain
PROSITE profilePS5007112.455238301IPR001356Homeobox domain
SMARTSM003891.4E-11241305IPR001356Homeobox domain
CDDcd000861.84E-13241302No hitNo description
SuperFamilySSF466892.35E-17243308IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.9E-29244305IPR009057Homeodomain-like
PfamPF059204.1E-19258297IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
APRWRTPTTS SWSTGCRQEP RSRARTSRSR CPRPPRTLRL SSGGTSPVPP GRTGPSRATQ  60
PCSGALGSWA PRRSCWRRSA TSAAGPRSXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXEG  120
VTVSGAEQQW RKTRLISLME EVCKRYRQYY QQLQAVISSF ETVAGLSNAA PFASIALRTM  180
SKHFKYLKST IQSQLRNTSK VAAGKDSLGK EDMANFGLMG GSAALMRGGN ANAFSQPHNI  240
WRPQRGLPER AVSVLRAWLF EHFLHPYPTD SDKQMLAKQT GLTRNQVSNW FINARVRLWK  300
PMVEEIHNLE MRQGHKSSAA DKNQLGVQQQ TQQHSPDSSG RPSDPSNSHQ GQSSSMSQNR  360
SAHAAHRHIQ SELSPMTHDM PGQVSFAYNG SGMAAHHQHH HGIALSHPHQ QVEGASGAGS  420
SGGVSLTLGL HQNNRAYIAE PLPAALPLNL AHRFGLEDVS DAYAMAASFG GQDRHFTKEM  480
GGHLLHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-17247305563Homeobox protein Meis2
3k2a_B6e-17247305563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB5466460.0AB546646.1 Triticum aestivum WBLH3 mRNA for BEL1-type homeodomain protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165654.10.0BEL1-like homeodomain protein 9
TrEMBLA0A446K3A40.0A0A446K3A4_TRITD; Uncharacterized protein
TrEMBLD4QFI40.0D4QFI4_WHEAT; BEL1-type homeodomain protein
STRINGTraes_1BL_2DCDCD191.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-67TALE family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]