PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_1BL_0F9F21D68.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 59aa MW: 6599.36 Da PI: 6.4915 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 38.2 | 4.3e-12 | 3 | 59 | 30 | 82 |
NAM 30 leevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgy 82 +e+vi+ vd+++++Pw+Lp+ +++++ + w++F+ r+ ++a+g r++r+t sgy Traes_1BL_0F9F21D68.1 3 IERVIPVVDVCSLDPWQLPEvhrgACAGHGEPWFYFCARQDREARGGRPSRTTPSGY 59 5578**************95456544557889**********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.068 | 1 | 59 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.7E-13 | 5 | 59 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 59 aa Download sequence Send to blast |
GDIERVIPVV DVCSLDPWQL PEVHRGACAG HGEPWFYFCA RQDREARGGR PSRTTPSGY |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK359954 | 7e-74 | AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020158921.1 | 2e-36 | NAC domain-containing protein 90-like | ||||
Swissprot | Q9FMR3 | 3e-16 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A452Z7N9 | 2e-35 | A0A452Z7N9_AEGTS; Uncharacterized protein | ||||
STRING | Traes_1AL_C76BCC7EC.1 | 1e-35 | (Triticum aestivum) | ||||
STRING | Traes_1BL_0F9F21D68.1 | 6e-37 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1005 | 38 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-18 | NAC domain containing protein 90 |
Publications ? help Back to Top | |||
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