PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_1AS_673985B1D.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 161aa MW: 17165.3 Da PI: 8.4985 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.7 | 3.1e-14 | 99 | 144 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W eEd ll v+++G+g+W ++a +++ R++kqc++rw + Traes_1AS_673985B1D.1 99 KGSWAMEEDTLLRAKVQEFGKGRWVKVALYLP-DRSGKQCRERWINQ 144 799*****************************.***********985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 20.476 | 94 | 149 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.1E-19 | 98 | 149 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 2.6E-12 | 98 | 147 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 7.9E-14 | 99 | 144 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 8.97E-16 | 99 | 151 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 6.35E-13 | 101 | 143 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MAEGSAYFDW DMAASGAGNH LTSFDHGGVA QHFVHIDGGA SAGVVVVSGA GSRASGGIRE 60 MDPTSFLGYG SSNAPAAIAV PARALLRARS SGQGLTRFKG SWAMEEDTLL RAKVQEFGKG 120 RWVKVALYLP DRSGKQCRER WINQLDPNIE VILPNLNFLT S |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020188726.1 | 1e-70 | transcription factor MYB46-like | ||||
TrEMBL | A0A446INT9 | 1e-112 | A0A446INT9_TRITD; Uncharacterized protein | ||||
STRING | Traes_1AS_673985B1D.1 | 1e-115 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP22654 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 8e-14 | myb domain protein 70 |
Publications ? help Back to Top | |||
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