PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_1AL_1FFBFB058.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 493aa MW: 52925.1 Da PI: 9.8574

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_1AL_1FFBFB058.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50	6.6e-16	423	466	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ Traes_1AL_1FFBFB058.1 423 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ 466 79***************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.4E-15	417	466	No hit	No description
SMART	SM00338	1.3E-12	419	491	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	421	466	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.7E-13	423	466	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.84E-27	423	477	No hit	No description
SuperFamily	SSF57959	5.44E-11	423	468	No hit	No description
PROSITE pattern	PS00036	0	426	441	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence Send to blast
PLVGPLPPVA HGFASGPSRQ FLPSPPLPLP PWLPPPSPPP PFPNGRRQPQ PQPALTAARG 60 LDPAPGGRES RGCPVQFGAD SSWEVGAAEI RSPDLPPIRW SPSSPEDKSR RVVRRRVLPQ 120 CAVSWICGSA TCDRVFAGGK GAALGTVVPE VFVPIGATSP RDRRFMIQAM ASQSQAGGGG 180 GGGYAGPGQR GQAQQGLGRQ GSLYSLTLDE VQSQLTEPLL SMNLDELLKS VFPDGVDPVG 240 GVAGQSEPAP GLLRQGSITM PPDLSKKTVD EVWKGIQDSP KRSGEEGSRR RRERQPTFGE 300 MTLEDFLVKA GVVAEGHLKD PIDLPANMGA VGSSVIEAAA PSLNPGAHWL QQYLEPQHPR 360 MAGPFMASHL GPQPLSVATG AIMEPIYPDG QITSPMLDAL SDPQTPRRKR GASDGVTDKV 420 VERRQKRMIK NRESAARSRA RKQAYTNELE NKVSRLEEEN ERLKKQKELD MMITSAPPPE 480 PKYQLRRTSS APV

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence Send to blast

PLVGPLPPVA HGFASGPSRQ FLPSPPLPLP PWLPPPSPPP PFPNGRRQPQ PQPALTAARG  60
LDPAPGGRES RGCPVQFGAD SSWEVGAAEI RSPDLPPIRW SPSSPEDKSR RVVRRRVLPQ  120
CAVSWICGSA TCDRVFAGGK GAALGTVVPE VFVPIGATSP RDRRFMIQAM ASQSQAGGGG  180
GGGYAGPGQR GQAQQGLGRQ GSLYSLTLDE VQSQLTEPLL SMNLDELLKS VFPDGVDPVG  240
GVAGQSEPAP GLLRQGSITM PPDLSKKTVD EVWKGIQDSP KRSGEEGSRR RRERQPTFGE  300
MTLEDFLVKA GVVAEGHLKD PIDLPANMGA VGSSVIEAAA PSLNPGAHWL QQYLEPQHPR  360
MAGPFMASHL GPQPLSVATG AIMEPIYPDG QITSPMLDAL SDPQTPRRKR GASDGVTDKV  420
VERRQKRMIK NRESAARSRA RKQAYTNELE NKVSRLEEEN ERLKKQKELD MMITSAPPPE  480
PKYQLRRTSS APV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	282	DSPKRS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU307112	0.0	EU307112.2 Triticum aestivum FD-like 2 protein mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020181441.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	4e-77	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A3B5Y3P1	0.0	A0A3B5Y3P1_WHEAT; Uncharacterized protein
STRING	Traes_1AL_1FFBFB058.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	8e-73	ABA-responsive element binding protein 3

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]