PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRAES3BF273700010CFD_t1 | ||||||||
Common Name | TRAES_3BF273700010CFD_c1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BES1 | ||||||||
Protein Properties | Length: 182aa MW: 19755.1 Da PI: 9.2508 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 127.8 | 1.3e-39 | 55 | 146 | 2 | 95 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 +s r+pt +ErEnn++RERrRR++a++iyaGLRa+++y+lpk+aD+n+Vl+ALc+eAG+vv+d+G++ r + + a s++ TRAES3BF273700010CFD_t1 55 TSLRHPTPRERENNRQRERRRRQVATRIYAGLRANAGYALPKHADQNDVLRALCAEAGYVVDDEGNVTRCPERSP--GVGASGSSD 138 689******************************************************************444444..555555555 PP DUF822 88 aspesslq 95 + ss + TRAES3BF273700010CFD_t1 139 HLQPSSHS 146 55545444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.5E-29 | 57 | 130 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MEGVAKSIMA PMEVAGAGRE EAEAAMEVAG RRGCIRSTRG PWTVRRQARG GAVKTSLRHP 60 TPRERENNRQ RERRRRQVAT RIYAGLRANA GYALPKHADQ NDVLRALCAE AGYVVDDEGN 120 VTRCPERSPG VGASGSSDHL QPSSHSGATE ATAGDIHQAL LEPEAEPKHK ISLELTLSFS 180 YM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 5e-12 | 24 | 123 | 338 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 5e-12 | 24 | 123 | 338 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 5e-12 | 24 | 123 | 338 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 5e-12 | 24 | 123 | 338 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010232995.1 | 4e-62 | BES1/BZR1 homolog protein 2 | ||||
TrEMBL | A0A077RQK7 | 1e-130 | A0A077RQK7_WHEAT; Uncharacterized protein | ||||
STRING | Traes_3B_31C92ED65.2 | 1e-68 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13201 | 30 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36780.1 | 6e-15 | BES1/BZR1 homolog 2 |
Publications ? help Back to Top | |||
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