PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRAES3BF099600120CFD_t1 | ||||||||
Common Name | TRAES_3BF099600120CFD_c1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 255aa MW: 28673.3 Da PI: 10.1124 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 19.8 | 1.8e-06 | 95 | 145 | 7 | 49 |
HHCHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKk........aeieeLeekvkeLeaeNkaLkkel 49 rr++kNRe+A+rs +RK+ a++ eLe + L++eN +Lk e TRAES3BF099600120CFD_t1 95 HRRMIKNRESATRSCARKQslsfsilqAYTVELEAELNHLKEENARLKAEE 145 69****************644444444788888888888888888888764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.3E-8 | 92 | 144 | No hit | No description |
CDD | cd14707 | 1.32E-16 | 93 | 142 | No hit | No description |
SuperFamily | SSF57959 | 7.96E-5 | 95 | 146 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MMYPMALANI MFQVMGDDMG FVPNGYVVIF VVPPSPPRQG SVGIVSHGLS DGRSAMTKAD 60 MMNYMGDRAM MENGGARKHG APDDQSCKRS IERCHRRMIK NRESATRSCA RKQSLSFSIL 120 QAYTVELEAE LNHLKEENAR LKAEEKTILL TKKKNAGGED DGAAQGERER QEGWRLVAAL 180 RQLHLVKGDL PFNFHSRAGK RMRMNCGYLS FLERVKKILL TKKQMLVEKM IEQSKENVNA 240 KKGGTLSRCC GNCIW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269|PubMed:17604002, ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020182640.1 | 4e-70 | protein ABSCISIC ACID-INSENSITIVE 5-like | ||||
Swissprot | Q8RZ35 | 2e-47 | ABI5_ORYSJ; bZIP transcription factor ABI5 homolog | ||||
TrEMBL | A0A077RRE3 | 0.0 | A0A077RRE3_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446Q622 | 0.0 | A0A446Q622_TRITD; Uncharacterized protein | ||||
STRING | Traes_3DL_E21790878.1 | 1e-74 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3830 | 35 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 4e-15 | bZIP family protein |
Publications ? help Back to Top | |||
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