PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF091400270CFD_t1
Common NameTRAES_3BF091400270CFD_c1, TRAES_3BF108400040CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 348aa    MW: 37232.6 Da    PI: 4.5567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF091400270CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.53.8e-14125172253
                      AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                              g++GVr +k +g+W+AeIr  +     + kr +lg+f+ta+ A +a+ aa +++
  TRAES3BF091400270CFD_t1 125 GHRGVRLRK-WGKWAAEIRNpF-----SgKREWLGTFDTADLASAAYQAASRSF 172
                              89*****99.**********66.....46******************9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.5E-7125169IPR001471AP2/ERF domain
PROSITE profilePS5103217.016125185IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-15125175IPR016177DNA-binding domain
SMARTSM003801.5E-9125188IPR001471AP2/ERF domain
CDDcd000186.04E-18126172No hitNo description
PRINTSPR003672.6E-7126137IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-17126176IPR001471AP2/ERF domain
PRINTSPR003672.6E-7148164IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MAPLSQHHMR IRDALAKRPK TRMLAGFGVK PSAAFSKPAQ LQAQALLPAA QPPRRRVRVL  60
YEDPDATDSD TDDEEEAAVA APASSKRCFE LFLGKAPPAK VFAKPVTPTA AASAVAACTT  120
SSAEGHRGVR LRKWGKWAAE IRNPFSGKRE WLGTFDTADL ASAAYQAASR SFIEEKRRRR  180
GQSVAAASPA RSAASTTPTS SSTTPTASSS SSTSAAPFAH PSPSSVLEAT KPADESLSPE  240
PTPVPVMVST TAETAQLPDD PEFYQDLLRG LQLPDIDPMD FRAGLDALDV SEASAYLDGE  300
QDLLLGDFAD EELDLDMDLD IGDDFLEMPG CDFGRGMDDF LHTVDFCV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020154634.10.0ethylene-responsive transcription factor ERF118-like
TrEMBLA0A077RUT20.0A0A077RUT2_WHEAT; Uncharacterized protein
STRINGMLOC_69438.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129302528
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.25e-11related to AP2 2
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]