PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF013700050CFD_t1
Common NameTRAES_3BF013700050CFD_c1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family BES1
Protein Properties Length: 333aa    MW: 35648.9 Da    PI: 8.5878
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF013700050CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222044.5e-6311436149
                   DUF822   6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                              +ptw+ErEnnkrRERrRRaiaaki++GLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg++p e+++ +g+s s sp+
  TRAES3BF013700050CFD_t1   1 MPTWRERENNKRRERRRRAIAAKIFSGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGCRPAERMDGIGCSVSPSPC 86 
                              69************************************************************************************ PP

                   DUF822  92 sslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149
                              ss+q        +sp++sy+asp+sssfps +s+ +++++++       + +lp+l++ s++++s
  TRAES3BF013700050CFD_t1  87 SSYQ--------PSPRASYNASPTSSSFPSGASSPFLPHSNNmvngvdaTPILPWLQTFSNSTAS 143
                              ****........99999999999999999999999999988889998889999999999887766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.1E-621137IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MPTWRERENN KRRERRRRAI AAKIFSGLRA HGGYKLPKHC DNNEVLKALC NEAGWVVEPD  60
GTTYRKGCRP AERMDGIGCS VSPSPCSSYQ PSPRASYNAS PTSSSFPSGA SSPFLPHSNN  120
MVNGVDATPI LPWLQTFSNS TASNKRPHLP PLLIHGGSIS APVTPPLSSP TARTPRMKTD  180
WDESVIQPPW HGSNSPCVVN STPPSPGRQM VPDPAWLAGI QISSTSPSSP TFSLMSSNPF  240
SVFKEAIPGG GSSRMCTPGQ SGTCSPVIPG MARHPDVHMM DVVSDEFAFG SSTNGGAQQA  300
TAGLVRAWEG ERIHEDSGSD ELELTLGSSR TRS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-23270374442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-23270374442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-23270374442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-23270374442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2524680.0AK252468.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf161n20, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020188462.10.0protein BZR1 homolog 2
SwissprotQ0JPT41e-171BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBLA0A3B6EEX60.0A0A3B6EEX6_WHEAT; Uncharacterized protein
STRINGTraes_3AS_5A6A80EA5.10.0(Triticum aestivum)
STRINGTraes_3B_CC5045B61.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-81BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]